Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00385 ATGGCGACCCATCACAGATTAGGAGAAACTGGTTTATCTGAGTCAGGGCCTTCAAGTCACCATTTACCTTATGCAGTTCTTCACGGGATAAATACTTCTTCTGCTTCAAGTTTTATcAATCAAGGatctgctttttcttttggggagCTTGAAGAAGCAATTGTTCTGCAAGGAGTTAAGTTTAGAAATGATGAAGCAAAAGCACCTTTATTCACAGGAAGGCCTGCAGCTACACTGGAAATGTTTCCTTCATGGCCAATGAGAAACCAGCCCAACCCAAGAGGAGGTTCCAAGTCAGGAGGGGAGAGCACTGATTCAGGATCAGCAGTGAACAATCTTTCAAGCAAAGCTGAGGTCCAGTTTGAACCAGAATCCCCAATGAGTAAAAAGGCATCTTGTTCAGATAATAAGGCTTTTGATCAGCAATATCTGCAGCTACAACAACTGCAACAGAAGATGGCGAGTGATACCTCAAGAGCAGGCCCATCACAGAATCAATCAGCTGCCAAATCACCTCAGGAAAAGAGGAAGGGAGCTGGTTCAACATCAGATAAACAGCTTGATGCAAAGACACTCAGACGTCTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGAATAAAGCTCACTCAGCTTGAACAAGAGCTTCACAGAGCGCGTTCTCAGGGACTGTTCTTGGGCTGTGGTGGTGCTGGTGGCAATATCAGCTCCGGAGCTGCAATTTTTGACATGGAATATGCGAGATGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGAACGGGTTGCAGGCGCCGTTATCGGACAGTGATCTGAGAGTTATCATTGAGGGTTATTTGTCCCATTACGATGAGATTTTCCGGCTAAAGGGAGTTGCCGCAAAATCAGATGTGTTTCACCTTTTAAGTGGGATGTGGACTTCCCCAGCCGAGCGCTGCTTCAATTGGATGGGTGGTTTTAGGCCCTCTGAGCTCATTacgATGTTAACACAACAGTTAGAGCCACTAGCTGAGCAGCAAATCATGAATATGTATAGCCTAAGACACTCCTCGCAGCAAGCGGAGGAGGCTTTGAGTCAAGGCCTAGAACAGCTCCAGCAGTCACTCGTCGACACCGTCGCCGGCGTTCCGGTCGTTGACGGCGTGCAACAGATGGTCGTCGCCATGAGCAAGCTTGCCAACCTTGAAGGCTTTGTCCGTCagGCTGATAATTTGAGACAACAGACCCTTCACCAATTATGTCGATTCCTGACGGTTCGTCAAGCAGCCAGATGTTTCCTTGTGATTGGAGAGTACTATGGTCGGCTTCGAGCCCTTAGTTCTCTATGGGCATCACGACCACGAGAGACCTTGATCAGCGATGAGACATCGTGCCAAACAACCACCGACTTGCAAATGGTTCAACCTTCACAGAATCATTTCTCGAGTTTCTG 1478 0.4696 MATHHRLGETGLSESGPSSHHLPYAVLHGINTSSASSFINQGSAFSFGELEEAIVLQGVKFRNDEAKAPLFTGRPAATLEMFPSWPMRNQPNPRGGSKSGGESTDSGSAVNNLSSKAEVQFEPESPMSKKASCSDNKAFDQQYLQLQQLQQKMASDTSRAGPSQNQSAAKSPQEKRKGAGSTSDKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQELHRARSQGLFLGCGGAGGNISSGAAIFDMEYARWLEDDHRHMAELRNGLQAPLSDSDLRVIIEGYLSHYDEIFRLKGVAAKSDVFHLLSGMWTSPAERCFNWMGGFRPSELITMLTQQLEPLAEQQIMNMYSLRHSSQQAEEALSQGLEQLQQSLVDTVAGVPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRFLTVRQAARCFLVIGEYYGRLRALSSLWASRPRETLISDETSCQTTTDLQMVQPSQNHFSSF 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00385 492 MobiDBLite consensus disorder prediction 90 112 - -
Bva09g00385 492 MobiDBLite consensus disorder prediction 177 191 - -
Bva09g00385 492 SMART brlzneu 186 262 IPR004827 GO:0003700|GO:0006355
Bva09g00385 492 Coils Coil 209 236 - -
Bva09g00385 492 ProSiteProfiles DOG1 domain profile. 253 461 IPR025422 GO:0006351|GO:0043565
Bva09g00385 492 Pfam Seed dormancy control 270 345 IPR025422 GO:0006351|GO:0043565
Bva09g00385 492 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 232 IPR004827 GO:0003700|GO:0006355
Bva09g00385 492 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Bva09g00385 492 PANTHER TRANSCRIPTION FACTOR TGA9 66 471 - -
Bva09g00385 492 PANTHER TRANSCRIPTION FACTOR TGA9 66 471 - -
Bva09g00385 492 SUPERFAMILY Leucine zipper domain 190 232 IPR046347 GO:0003700|GO:0006355
Bva09g00385 492 MobiDBLite consensus disorder prediction 149 191 - -
Bva09g00385 492 Gene3D - 189 238 - -
Bva09g00385 492 MobiDBLite consensus disorder prediction 149 172 - -
Bva09g00385 492 Pfam bZIP transcription factor 189 230 IPR004827 GO:0003700|GO:0006355
Bva09g00385 492 MobiDBLite consensus disorder prediction 81 112 - -
Bva09g00385 492 CDD bZIP_HBP1b-like 190 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00385 Bva-Chr9 2085280 2091506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00385 141 492 bZIP Transcription Factor Family AT1G08320 73.596 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva09g00385 DOG1 1.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00385 K14431 - gmx:100775461 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00385 09 2085280 2091506 Bva09g00385 09 2085280 2091506 ECH