Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00377 ATGGCGGAAGAACATCGATGCCAAGCTCCACAGTTATGCCCAAACAATTGCGGTTTCTTTGGTAGCCCTACCACGCAAAATCTATGTTCCAAATGCTACGGAGATTTGCAACTCAAGGAACAACAATCCTCTTCCGCGAAGCTTGTTCTCAACCAAACCCTTGCCCCTGTGCCGTCGACGATCTCAGAACCATCATCATCGTCAGAACCAGTTGCAGTTCTCGCCGTCCCATCATCTTCTGCTGCAGCTGATCCGCCCCGGGCTGTAGAGGAGGCGAAAAGTGCATCACCGGCGCAGCCACAGCAGCAGCCGAGCAGGTGTATGACATGCAGGCGGCGCGTGGGTCTGACTGGGTTCAAGTGCCGGTGCGGGTTGACATTTTGCGGTACCCACCGTTACGCGGAACGGCACGGGTGCGAGTTCGATTTCAAAGGGATGGGTAGGGAGCAGATCGCAAAGGCAAATCCTGTCGTCAAGGCGGAGAAGCTCGAGAAGATCTA 500 0.55 MAEEHRCQAPQLCPNNCGFFGSPTTQNLCSKCYGDLQLKEQQSSSAKLVLNQTLAPVPSTISEPSSSSEPVAVLAVPSSSAAADPPRAVEEAKSASPAQPQQQPSRCMTCRRRVGLTGFKCRCGLTFCGTHRYAERHGCEFDFKGMGREQIAKANPVVKAEKLEKI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00377 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Bva09g00377 166 Gene3D - 1 70 - -
Bva09g00377 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Bva09g00377 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Bva09g00377 166 Pfam A20-like zinc finger 11 33 IPR002653 GO:0003677|GO:0008270
Bva09g00377 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Bva09g00377 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 166 - -
Bva09g00377 166 MobiDBLite consensus disorder prediction 57 104 - -
Bva09g00377 166 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Bva09g00377 166 MobiDBLite consensus disorder prediction 57 74 - -
Bva09g00377 166 SUPERFAMILY AN1-like Zinc finger 90 161 IPR035896 -
Bva09g00377 166 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 166 - -
Bva09g00377 166 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Bva09g00377 166 Gene3D - 78 162 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00377 Bva-Chr9 2031428 2032741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00377 1 166 C2H2 Transcription Factor Family AT3G52800 55.556 3.42e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00377 - - mesc:110625469 218.779