Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00367 ATGAAGGAAATTCGAATAAATGAACGGACGCGATCTGCTGAGCCACCCATCGCAAACGGAATTCAAGATTTTGCCCCAGCACAGAAAAACCctacatctatatatatccttCTAGTTCTACTCCGTCGCGCCTCTTTCTGCCGAAACCCTAGGAACAATTTGCAAGCGCCGTTATCTGTTGCAAAGATGAAGGTGATCGCTGCTTATTTGCTCGCCGTCTTGGGAGGGAACACAAGCCCTACAGCGGATGATCTGAAGTCTATCCTCGGTTCAGTTGGAGCTGAGGCTGATGATGAGAAGATTGAGTTGCTCTTGTCTGAAGTCTGTGGCAAAGATATCACTGAGCTAATTGCTGCTGGAAGAGAGAAGTTGGCTTCAGTTCCTTGTGGTGGTGGGGCAGTTGCTGTAGCCCCAGCTGCCGGTGGTGCTGCTGGTGGTGGAGCAGCACCTCCACCTGAGGcaaaggaggaaaagaaggtagaagagaaagaagagtcCGATGATGATATGGGTTTCAGTTTATTCGACTA 530 0.4509 MKEIRINERTRSAEPPIANGIQDFAPAQKNPTSIYILLVLLRRASFCRNPRNNLQAPLSVAKMKVIAAYLLAVLGGNTSPTADDLKSILGSVGAEADDEKIELLLSEVCGKDITELIAAGREKLASVPCGGGAVAVAPAAGGAAGGGAAPPPEAKEEKKVEEKEESDDDMGFSLFD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00367 176 Pfam 60s Acidic ribosomal protein 79 175 - -
Bva09g00367 176 Gene3D - 62 121 IPR038716 -
Bva09g00367 176 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 39 176 IPR044076 GO:0002182|GO:0003735|GO:0022625
Bva09g00367 176 MobiDBLite consensus disorder prediction 140 176 - -
Bva09g00367 176 MobiDBLite consensus disorder prediction 152 166 - -
Bva09g00367 176 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 39 176 - -
Bva09g00367 176 Hamap 50S ribosomal protein L12 [rpl12]. 64 176 IPR027534 GO:0003735|GO:0005840|GO:0006414
Bva09g00367 176 CDD Ribosomal_P2 63 176 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00367 Bva-Chr9 1954784 1957099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00367 63 176 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 67.544 2.83e-32 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00367 09 1954784 1957099 Bva09g00367 09 1954784 1957099 ECH
Bva09g00367 09 1954784 1957099 Bva07g02280 07 18804047 18805321 ECH