Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00365 aTGACCGATTCCACCATTCTACTTTCCTTCCTTAACCCCttcaaaaatccaaaaaacgCTACTCTCCCACTCACTTCAGTCTTCGCTTGTCTCTCTCCGATGTCCCTTCGTAATACAATGGACTCATGGCTTGAGGATCTAACTGACGACCTCCAGAGCCTTAGCTTCGCGTCCACCACCACTACCACCACCGCAGATATCAAACGGAGCACAAGCTCCGGCTCTGAAACCACCACTTTGACGGCTTCCTCCTCTGCCCAACTAAGCTCACTTCCATTGCCTAACAATAAACCACACGCGCCGTCATCGGACCCTTGTTGGGCTGCCATCCATCGGATCCAATCAGAGTCCCCGAGCAGGCACATCGTCCCCTCAGACCTCCGGTTCACCCGACGGCTTGGCTCGGGCGACATAGGCTCCGTGTATCTTGCGGAGCTCAAGTGTCACAATGGCGAAGGCTGTGTCTTCTTCGCGGCTAAAGTGATGGACAAGAAAGAGCTGGTAAGCCGGAGTAAGGAAGGGCGGGCAAGGACAGAAAGGGAAATTCTCGAATTGTTGGATCACCCATTTTTGCCCACTCTCTACGCGACCATAGACACGCCCAAATGGCTTTGCCTCTTGACAGAGTTCTGTCCCGGCGGGGACTTGCACGTGCTCCGTCAACGCCAGCCCAACAAACGCTTCAATGAAACCGCGGTCAGATTCTACGCATCAGAGGTGGTGGTAGCATTAGAATACCTTCACATGCTGGGGATAGTGTACCGTGATCTCAAACCTGAAAATGTCTTAGTTCGGTCGGGCGGCCACATCATGCTCACAGACTTTGACCTCTCGTTAAAATGCGATGATTCGACATCAACGGCCCAGATCATTTCTGATCAAAACCCTCTTCCCGCGGCTCCACAGAAAGAATATAACGGTGAACCCCATCAATTTACCTCGTCTTCATGCATATTACCCAACTGTATAGTCCCTGCCGTGTCGTGTTTTCACCCAAAACGCAAGCGGAAGAAGAAGCAAGGCCAGCGTAATGGGCCTGAATTTGTAGCGGAGCCCATTGATGTCCGATCCATGTCGTTTGTTGGGACCCATGAGTACTTGGCTCCTGAGATTGTGTCCGGCGAGGGCCATGGTAGTGCTGTGGATTGGTGGACACTAGGGATATTCatatttgaattgttttatGGTGTCACCCCTTTTAGGGGACTAGACAATGAGCTAACCTTGGCTAACATTGTGGCTCGAGCCCTTGAGTTCCCTAAGGAAACCGTCGTACCTGCCCCGGCGAAGGACCTTATATCGCAGTTATTGGTTAAGGACCCAGCGAGGCGGCTAGGGTCAACAATGGGAGCTTCGGCGATCAAGCACCACCAGTTTTTTCGAGGGGTCAATTGGGCATTATTGAGGTGTACGCCTCCTCCTTTTACGCCCCCACCATACATTAAAGAAGTTGTATCCGATGAAAGCTGTCTTCAGACCcctattgattatttttg 1496 0.5047 MTDSTILLSFLNPFKNPKNATLPLTSVFACLSPMSLRNTMDSWLEDLTDDLQSLSFASTTTTTTADIKRSTSSGSETTTLTASSSAQLSSLPLPNNKPHAPSSDPCWAAIHRIQSESPSRHIVPSDLRFTRRLGSGDIGSVYLAELKCHNGEGCVFFAAKVMDKKELVSRSKEGRARTEREILELLDHPFLPTLYATIDTPKWLCLLTEFCPGGDLHVLRQRQPNKRFNETAVRFYASEVVVALEYLHMLGIVYRDLKPENVLVRSGGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPAAPQKEYNGEPHQFTSSSCILPNCIVPAVSCFHPKRKRKKKQGQRNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKETVVPAPAKDLISQLLVKDPARRLGSTMGASAIKHHQFFRGVNWALLRCTPPPFTPPPYIKEVVSDESCLQTPIDYF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00365 498 Gene3D Transferase(Phosphotransferase) domain 1 215 286 - -
Bva09g00365 498 Pfam Protein kinase domain 357 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00365 498 Pfam Protein kinase domain 130 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00365 498 SUPERFAMILY Protein kinase-like (PK-like) 102 486 IPR011009 -
Bva09g00365 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Bva09g00365 498 PANTHER FLIPPASE KINASE 1-RELATED 40 498 - -
Bva09g00365 498 Gene3D Phosphorylase Kinase; domain 1 126 214 - -
Bva09g00365 498 Gene3D Transferase(Phosphotransferase) domain 1 356 478 - -
Bva09g00365 498 MobiDBLite consensus disorder prediction 65 102 - -
Bva09g00365 498 MobiDBLite consensus disorder prediction 65 97 - -
Bva09g00365 498 PANTHER OS11G0150700 PROTEIN 40 498 - -
Bva09g00365 498 SMART serkin_6 127 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00365 498 ProSiteProfiles Protein kinase domain profile. 127 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00365 Bva-Chr9 1941036 1944944 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00365 40 498 AGC Kinase Gene Family AT3G44610 65.319 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva09g00365 Pkinase 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00365 K08286 - gmx:100792738 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00365 09 1941036 1944944 Bva09g00365 09 1941036 1944944 ECH
Bva09g00365 09 1941036 1944944 Bva07g02282 07 18813984 18817580 ECH