Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00363 ATGGAGATATCAACCAGTACGTGTGAGATAGTGGAATCAACAGACGAGATAAATTCTGAGTtaaaaatggatgaaaaagCTGAGAGTAGTAGTAGCCAAAAATCAGGGAAAAAGTATTCTATAGAGGATGATATTAACCGTCTTTTCCAGGCTATTGACATTAAAAATACAGCTAGAGGTCTTAGTCTGTCGCATTCACAAAAGAGTGCTCTTAAAAGGCCCATCAAAGTTAGTTCATCTCAGGCTTCAGGAATTGGGATCTCAGAGCCTGTAAGTTTGAAGCAGGCACTTAGAGGATTGTGCATTTCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACAATCAAAGCCATCCACTTCGTCAAGAGTGTCAGAAGCTGGAACTATCAAAAAGTTGTATACAACAGTGATAGATGAGGGAAAAGGGAACCTGGTAGAAATCTCCCTTGTGCCAGAAACATCTACATCTTCTGATAAATTTCCCCGGCAAGATATATCAAGCTCAAGTGCTCATCATTTGACTTCTTTAGTTGATGGATCTAACCCAAAGGCAATGACAACCAGGTTAGCATCTCGAGATCAGGTTGTTCCCCTTCCATCAGAGGGTGAGGATGAGAAATTAAGCAAAGGCATTGAAAATTCATCATCAATTGCTAATGCAAGTGAAGTACCAGAGGTCAAGACAGTTTCTACTTCCTTGAGCAAAGCTTCTCCCATCACATTAATGCCTGATACAGAGCAGGAAGCAAAGTCGTTTCCTACAGCTTCCCCATCTCGCTCTAGCACTGCTAGCGGGGTGGACAAACCCACAAGCAGTAATACATGTTTGATGAAGCCAATCTTCAGGAACAAAAGCTTccttaagaagaaaataaaacggGATATCTGTTCGGCTTCAAGCAGCTCCACTACATGCACCAGAAAAGTTGACAATGATTTGGATCCAAGTACAAGTAATTTGGACAAGGAGACTGACAATTCTGATTTTAAGcgtgaaatgaaagaaaatgataaactgTCTCCGTGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTGGGTGTCGATTCAAACAAATCTGGTTTCAGTTTGAATTGCAGCAAGAGAACTAAGTTTCTAGTGACAAAAACTGATGAGAAATCAAGATCAAAGGAGAAGAGTGAGTTCTCTCAAAGCTCAAAAAGTAGCATTGGCGAGTATAGTAGTAGCACAAGCATTAGTGAGGAGAGCAATATAAGTGGCTCCAGTCGTAGTGGCCACAGGCCTCATATGTCAAAACACCTGAGATGGGAAGCTATTCGTACTGTCCAGCAACAGCATGGTAACTTAAGTTTGAGGCACTTCAAGCTACTCAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTGGCAGAACTAATTGGTTCAAGCTGCCATTTTGCTTTGAAAGTGATGGATAATGAATTTTTGGCTAGCCGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAAATCTTACAGGTGCTGGATCATCCTTTTCTACCCACACTTTATGCCCATATTGCTACGGATAAGCTCTCTTGTTTGGTTATGGAGTATTGTCCTGGAGGAGATTTGCATGTGCTGCGCCAGAGGCAAACCTACAGGAGTTTCTCTGAACAGGCGGCCAGGTTTTATGTCGCTGAAGTTCTCCTTGCTCTCGAATACTTACACATGCTAGGAGTTGTATATCGAGACCTAAAGCCAGAAAATATCCTGGTCCGAGAAGATGGTCACATTATGCTGACAGATTTTGACTTATCACTCAGATGTTCAGTCAACCCAACGTTGGTGAAATCATCTTCTGTAGATGTCGATTCAACAAAGAAGATGTCTAGCCCCTGTGCGGAGGGTAGTTGCATACACCCTTTCTGTCTCCAACCCAATTGGCAAGTATCTTGTTTTACTCCCATTCTGTTATCTGCTGGAGGAAAATCTCGAAAGATGAAGTCTGACATAGCTGCCCAGGTTGGTCCATTGCCACAGCTTGTAGTGGAGCCAACGAGTGCACGTTCCAATTCCTTCGTCGGAACCTACGAATACCTTGCTCCAGAGATTATCAAAGGTGAGGGTCATGGGAGTGCCGTGGATTGGTGGACTTttggtatatttttatttgagctTTTATATGGTAGAACTCCCTTCAAGGGTCCAGCAAATGAGGATACATTGGCCAATGTAGTTTCACAGAGCCTTAAGTTCCCTGATGCTCCTCTAGTCAGCTTTAATGCAAGAGACTTGATCAGAGGATTGTTAATTAAGGACCCTGAAAATCGATTAGGTTCGGTAAAAGGTGCTGCCGAGATAAAGCAACACCCCTTCTTTGAAGGCCTCAACTGGGCTCTGATACGGTGTGCAGTGCCACCAGAGCTGCCCAAGTTCCGTGATTTCGTCATCGGTGCACCATCTTTGACTTCACAGAAGGAGAATGTGAATGATTTAGAGGACACGGAAGATTGTGAGGACTTTGAACTGTTTTA 2507 0.4196 MEISTSTCEIVESTDEINSELKMDEKAESSSSQKSGKKYSIEDDINRLFQAIDIKNTARGLSLSHSQKSALKRPIKVSSSQASGIGISEPVSLKQALRGLCISQASEMAALKRQSKPSTSSRVSEAGTIKKLYTTVIDEGKGNLVEISLVPETSTSSDKFPRQDISSSSAHHLTSLVDGSNPKAMTTRLASRDQVVPLPSEGEDEKLSKGIENSSSIANASEVPEVKTVSTSLSKASPITLMPDTEQEAKSFPTASPSRSSTASGVDKPTSSNTCLMKPIFRNKSFLKKKIKRDICSASSSSTTCTRKVDNDLDPSTSNLDKETDNSDFKREMKENDKLSPCSSNHSIEVNSINVGVDSNKSGFSLNCSKRTKFLVTKTDEKSRSKEKSEFSQSSKSSIGEYSSSTSISEESNISGSSRSGHRPHMSKHLRWEAIRTVQQQHGNLSLRHFKLLRRLGCGDIGTVYLAELIGSSCHFALKVMDNEFLASRKKMFRAQTEREILQVLDHPFLPTLYAHIATDKLSCLVMEYCPGGDLHVLRQRQTYRSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSVDVDSTKKMSSPCAEGSCIHPFCLQPNWQVSCFTPILLSAGGKSRKMKSDIAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGPANEDTLANVVSQSLKFPDAPLVSFNARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAVPPELPKFRDFVIGAPSLTSQKENVNDLEDTEDCEDFELF 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00363 835 SUPERFAMILY Protein kinase-like (PK-like) 423 805 IPR011009 -
Bva09g00363 835 MobiDBLite consensus disorder prediction 377 427 - -
Bva09g00363 835 Gene3D Transferase(Phosphotransferase) domain 1 678 801 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 153 188 - -
Bva09g00363 835 PANTHER FLIPPASE KINASE 1-RELATED 1 834 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 17 38 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 247 274 - -
Bva09g00363 835 ProSiteProfiles Protein kinase domain profile. 450 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00363 835 Gene3D Transferase(Phosphotransferase) domain 1 530 599 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 153 274 - -
Bva09g00363 835 SMART serkin_6 450 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00363 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Bva09g00363 835 MobiDBLite consensus disorder prediction 302 346 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 211 241 - -
Bva09g00363 835 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 834 - -
Bva09g00363 835 CDD STKc_phototropin_like 448 805 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 314 339 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 392 421 - -
Bva09g00363 835 MobiDBLite consensus disorder prediction 377 391 - -
Bva09g00363 835 Gene3D Phosphorylase Kinase; domain 1 448 529 - -
Bva09g00363 835 Pfam Protein kinase domain 451 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00363 835 Pfam Protein kinase domain 681 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00363 Bva-Chr9 1932390 1936832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00363 400 835 AGC Kinase Gene Family AT5G03640 65.646 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva09g00363 Pkinase 6.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00363 - - gmx:100784955 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00363 09 1932390 1936832 Bva09g00363 09 1932390 1936832 ECH