Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00360 ATGGCGGCTGCTGTCGTTTCGAGGCAGTTGAGTGGTTCCTCAGGTTGGCGGTCGAGAAGCTTGAAGGAAATGTGGAATGAACCTGACGTGTTCCGGCGGAGTTCACAGCGGGTGGTGgaggatgatgaagaagaactAAAGTGGGCGGAATTAGAGAGGCTACCAACTTATGATAGAATGAGGAAAGGGATATTGAAGCAGGTTACTGGCTCTGGTAGGGTGGTTCATGATGAGGTTGATGTTGCAAAGCTTGGGCCTCAAGATAAGCAGCTCTTGATGGAGAGCATTCTTAAGATTGCTGAACAAGACAACGAGAGGTTCCTTAGGAGGCTCAGGAGCAGAATTGACAGGGTGGGAATTGAGATTCCGAAAATTGAAGTGAGATATGAGCACTTGTCTATAGAAGGAGAAGCCTACGTTGGGACCAGAGCACTTCCAACTCTGCTTAACACCACCTTGAATACAGTAGAGGAATTTCTTGGGATGGTTGGTCTCTCTCCTCCAAAGAAAAGAGTCATTAAGATCCTTCGAGATGTAAGCGGGATAATAAAACCATCAAGGATGACACTGCTCCTCGGTCCTCCTGGTGCAGGAAAAACAACGTTATTAAAGGCACTAGCAGGGAAAATTGACAAAGATTTGAAGCTAACTGGGAGAATCACCTATTGTGGGCATGAATTTAAAGAATTCATTCCTCAGAGAACAAGTGCTTATATTAGCCAACACGATCTGCATTTTGGAGATATGACAGTTCGCGAGACATTTGATTTTGCTGGACGTTGCCTTGGAGTTGGAACTAGGTATGATTTGATTACAGAGTTATCCAGAAGGGAGATTCAAGCTGGTATCAAACCTGATGCTGAGATCGATGCATTTATGAAAGCCATTTCTGCTTCTGGCCAGGAAACTAGCTTGATCACAGACTATGTTCTCAAGATTCTTGGTTTGGATATCTGTGCTGATATTATGATTGGGGATGAAATGAGGAGGGGTATCTCTGGGGGACAAAAGAAGCGCGTAACTACTGGAGAAATGTTGGTTGGAGATGCAAAAGCATTTTTCATGGATGAAATATCAACAGGGTTAGACATTCTAACGTACTACACAATTGGGTTTGCACCTGCTGCAAGTAGGTTTTTCAAACAGCTATTAGCTTTCGTTGCCATACACCAGATGGCAATTTCTCTTTTCCGCTTCATTGCAGCCGTTTGTAGAACACAGACTGTTGCCAACTCATTTGGTTTCTTTGCCTTGTTGCTAGTGTTTGTTTTAGGTGGTTATGTCGTTTCAAAAGATGACATCCCATCATGGCTGCTTTGGAGTTATTACACACTTCCAATGATGTATGGACAAAATGCTATTGCTATAAATGAGTTTCTGGATGATAGATGGAGCACACCTACGACCAACACCGGCCAACCCACAGTTGGAAAGACCCTTCTTGATGTTAGAGGCTTGTTTTTGACAGAATCATGGTATTGGATTAGCGTTGGGGCACTTTTTGGGTTTTCTATAGTTTACAATATCCTCTTCATTGTAATACTGACATATTTGAATCCAAGTGGTGATAACAAACATATTTTGGACGATGACTCTGGAAGTGATAGCATGCGAAAGGGAACATCCAATCCAGAAGGTTTTGATATGCCAGTGAGAAATACTAACTCCACTGCTAGTGTTACAAATCCTCAACCTAAAAGAGGAATGGTTCTGCCCTTCCAGCCCCTTTCACTGGCCTTCAACCATGTGAACTACTATGTGGATATGCCTCAAGAGATGAAGAGCCAAGGGGCTGAAGAGAGTCGACTGCATCTGCTAAAAGATGTTAGTGGCGCTTTTAGGCCAGGTGTCCTAACAGCACTAGTTGGGGTCAGTGGAGCTGGAAAGACCACTTTGATGGATGTCCTATCAGGTAGAAAAACCAGTGGCTATATTGAAGGCAGTATAAGCATATCTGGTTATCCCAAGAACCAAGCTACATTTGCTCGGATCAGTGGTTACTGTGAACAGAATGACATCCATTCACCATGTGTTACTGTCTATgaatctcttctcttttctgcCTGGCTCCGTCTTTCCTCAGATGTAAACAAGGAAACTCGAAAGATGTTTGTTGAAGAGGTCATGGGGTTGGTTGAGCTAAACCCGTTGAGAAACGCTCTAGTTGGTCTTCCGGGAGTGGATGGTCTGTCGACTGAGCAGAGAAAGAGGCTAACCATTGCTGTAGAGTTGGTTGCTAATCCCTCCATTATCTTTATGGATGAGCCCACATCAGGGCTTGACGCCAGAGCCGCTGCAATTGTTATGCGTACTGTGAGGAACACAGTAGATACTGGAAGAACTGTTGTCTGCACAATCCACCAACCAAGTATTGATATATTTGAAGCTTTTGATGAGCTCCTTTTGTTGAAAAGAGGAGGAAGAGTGATTTATGCTGGACCTCTTGGCCATCATTCTCACAAGCTTATAGAATATTTTGAGGCTATTCCAGGGGTTCCAAAGATTAAAGAAGGTTACAATCCTGCTACTTGGATGTTAGAAAGTAGCACTAGTGCAGTTGAGGCTCAACTTACTATTGACTTTGCCGATGTTTATGCCAATTCTGAGCTCTATGGGAGAAATCAACAACTTATAGAGGAACTAAGCACTCCACTACCGGGTTCGGAGGATCTTCACTTCCCCACCAAATACTCCCAGAATTTCATTACTCAATGCTTCGTTTGTTTCTGGAAACAACATTGGTCATATTGGAGGAATTCACAATTTAATGCCATCCGGTTTATCATCGCAGTTGCGCTGGCCATTGTTTTTGGTGTGATCTTTTGGAACAAAGGGGAGAAAATAGAAAAGCAACAAGATCTGTCTGATCTTCTTGGTGTCACCTATGCTGctgttctttttcttggagCTATCAATTGTTCTTCTGTGCAACCGGTTGTGTCAGTTGAGAGAACAGTCTTCTATCGTGAAAGAGCTGCAGGGATGTATTCGGAGATGCCTTATGCCATAGCCCAGTTAGCCATTGAGATGATTTATGTTTCAATCCAATCCATTGTCTTCGTCCTGTTACTGTACTCTATGATTGGATACAACTGGGATGCTGGCAAGTTCTTCTATTTCTACTACTTCATATTCATGTGCATGACCTACTACTCATTGTTTGGGATGGCGGTGACTGCCTTGACTCCTGGTCAACAATTTGGAGCCATTCTTATGGTCTTCTTCTTTACCTTCTGGAACTTGTTCTGTGGTTTCGTGATCCCTAGGCCGCTTATTCCAGTATGGTGGAGATGGTACTACTGGGGTTCTCCTCTTTCATGGACACTCTATGGCATTTTCGCATCACAATTTGGTGATGTCAAGACCATGGTTCAAATTCCTGGCGAAGAACCAAAGGCAATAAAAGCTTACCTCAAAGATTCTCTGGGTTTTGATCATGACTTCCTTGTACCTGTAGCCTTGGCTCATGTGGGCTGGGTTATCCTGTTCGTGTTATTGTTTACCTATTGCATCAAATTCATCAATTTCCAAAAGAGATG 3539 0.427 MAAAVVSRQLSGSSGWRSRSLKEMWNEPDVFRRSSQRVVEDDEEELKWAELERLPTYDRMRKGILKQVTGSGRVVHDEVDVAKLGPQDKQLLMESILKIAEQDNERFLRRLRSRIDRVGIEIPKIEVRYEHLSIEGEAYVGTRALPTLLNTTLNTVEEFLGMVGLSPPKKRVIKILRDVSGIIKPSRMTLLLGPPGAGKTTLLKALAGKIDKDLKLTGRITYCGHEFKEFIPQRTSAYISQHDLHFGDMTVRETFDFAGRCLGVGTRYDLITELSRREIQAGIKPDAEIDAFMKAISASGQETSLITDYVLKILGLDICADIMIGDEMRRGISGGQKKRVTTGEMLVGDAKAFFMDEISTGLDILTYYTIGFAPAASRFFKQLLAFVAIHQMAISLFRFIAAVCRTQTVANSFGFFALLLVFVLGGYVVSKDDIPSWLLWSYYTLPMMYGQNAIAINEFLDDRWSTPTTNTGQPTVGKTLLDVRGLFLTESWYWISVGALFGFSIVYNILFIVILTYLNPSGDNKHILDDDSGSDSMRKGTSNPEGFDMPVRNTNSTASVTNPQPKRGMVLPFQPLSLAFNHVNYYVDMPQEMKSQGAEESRLHLLKDVSGAFRPGVLTALVGVSGAGKTTLMDVLSGRKTSGYIEGSISISGYPKNQATFARISGYCEQNDIHSPCVTVYESLLFSAWLRLSSDVNKETRKMFVEEVMGLVELNPLRNALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHHSHKLIEYFEAIPGVPKIKEGYNPATWMLESSTSAVEAQLTIDFADVYANSELYGRNQQLIEELSTPLPGSEDLHFPTKYSQNFITQCFVCFWKQHWSYWRNSQFNAIRFIIAVALAIVFGVIFWNKGEKIEKQQDLSDLLGVTYAAVLFLGAINCSSVQPVVSVERTVFYRERAAGMYSEMPYAIAQLAIEMIYVSIQSIVFVLLLYSMIGYNWDAGKFFYFYYFIFMCMTYYSLFGMAVTALTPGQQFGAILMVFFFTFWNLFCGFVIPRPLIPVWWRWYYWGSPLSWTLYGIFASQFGDVKTMVQIPGEEPKAIKAYLKDSLGFDHDFLVPVALAHVGWVILFVLLFTYCIKFINFQKR 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00360 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 372 IPR027417 -
Bva09g00360 1179 Pfam ABC-2 type transporter 787 841 IPR043926 GO:0140359
Bva09g00360 1179 Pfam ABC transporter 606 758 IPR003439 GO:0005524
Bva09g00360 1179 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 11 363 - -
Bva09g00360 1179 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 364 1179 - -
Bva09g00360 1179 PANTHER ATP-BINDING CASSETTE TRANSPORTER 11 363 - -
Bva09g00360 1179 PANTHER ATP-BINDING CASSETTE TRANSPORTER 364 1179 - -
Bva09g00360 1179 SMART AAA_5 185 415 IPR003593 -
Bva09g00360 1179 SMART AAA_5 615 807 IPR003593 -
Bva09g00360 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 816 IPR027417 -
Bva09g00360 1179 CDD ABCG_PDR_domain2 575 813 IPR034003 -
Bva09g00360 1179 Pfam ABC transporter 176 358 IPR003439 GO:0005524
Bva09g00360 1179 Pfam Plant PDR ABC transporter associated 464 527 IPR013581 -
Bva09g00360 1179 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 432 IPR003439 GO:0005524
Bva09g00360 1179 Pfam ABC-transporter N-terminal 95 150 IPR029481 -
Bva09g00360 1179 Gene3D - 593 826 IPR027417 -
Bva09g00360 1179 Gene3D - 162 403 IPR027417 -
Bva09g00360 1179 MobiDBLite consensus disorder prediction 537 564 - -
Bva09g00360 1179 Pfam ABC-2 type transporter 903 1117 IPR013525 GO:0016020|GO:0140359
Bva09g00360 1179 Pfam ABC-2 type transporter 364 459 IPR013525 GO:0016020|GO:0140359
Bva09g00360 1179 MobiDBLite consensus disorder prediction 529 566 - -
Bva09g00360 1179 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 830 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00360 Bva-Chr9 1918009 1925019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00360 603 829 Calmodulin-binding Proteins AT2G36910 25.751 1.91e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00360 K08711 - sind:105170794 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00360 09 1918009 1925019 Bva09g00360 09 1918009 1925019 ECH