Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00359 ATGGCGGCTGCTGTCGTTTCGAGGCAGTTGAGTGGTTCCTCAGGTTGGCGGTCGAGAAGCTTGAAGGAAATGTGGAATGAACCTGACGTGTTCCGGCGGAGTTCACAGCGGGTGGTGgaggatgatgaagaagaactAAAGTGGGCGGAATTAGAGAGGCTACCAACTTATGATAGAATGAGGAAAGGGATATTGAAGCAGGTTACTGGCTCTGGTAGGGTGGTTCATGATGAGGTTGATGTTGCAAAGCTTGGGCCTCAAGATAAGCAGCTCTTGATGGAGAGCATTCTTAAGATTGCTGAACAAGACAACGAGAGGTTCCTTAGGAGGCTCAGGAGCAGAATTGACAGGGTGGGAATTGAGATTCCGCAAATTGAAGTGAGATATGAGCACTTGTCTATAGAAGGAGAAGCCTACGTTGGGACCAGAGCACTTCCAACTCTGCTTAACACCACCTTGAATACAGTAGAGGAATTTCTTGGGATGGTTGGTCTCTCTCCTCCAAAGAAAAGAGTCATTAAGATCCTTCAAGATGTAAGCGGGATAATAAAACCATCAAGGATGACACTGCTCCTCGGTCCTCCTGGTGCAGGAAAAACAACGTTATTAAAGGCACTAGCAGGGAAAATTGACAAAGATTTGAAGGTTTGTTTTCTGATGGGTGACTACTTGTTTTTCAAACAGCTATTAGCTTTCATTGCCGTACACCAGATGGCGATTTCTCTTTTCCGCTTCATTGCAGCCGTTTGCAGAACACAGACTGTTGCCAACTCATTTGGTTTCTTTGCCTTGACGATAGTGTTTGTTTTAGGTGGTTTTGTCATTTCAAAAGATGACATCCCATCATGGCTGCTTTGGAGTTATTACACACTTCCAATGATGTATGGACAAAATGCTATTGCTATAAATGAGTTTCTGGATGATAGATGGAGCACACCTACGACCAACAACAGCCAACCCACGGTTGGAAAGACCCTTCTTGATGTTAGAGGCTTGTTTTTGACAGAATCATGGTATTGGATTAGCATTGGGGCACTTTTTGGGTTTTCTATAGTTTACAATATCCTCTTCATTGTAGTACTGACATATTTGAATCCAAGTGGTGATAACAAACATATTTTGGACGATGACTCTGGAAGTGATAGCATGCGAAAGGGAACATCCAATCCAGAAGGTTTTTCTGCTAGAGTTACAAATCCTCAACCTAAAAGAGGAATGGTTCTGCCCTTCCAGCCTCTTTCACTGGCCTTCAACCATGTGAACTACTATGTGGATATGCCTCAAGAGATGAAGAGCCAAGGGGTTGAAGAGAGTCGATTGCATCTGCTAAAAGATGTTAGTGGCGCTTTTAGGCCAGGTGTCCTAACCGCACTAGTTGGGGTCAGTGGAGCTGGAAAGACCACTTTGATGGATGTCCTAGCAGGAAGAAAAACCAGTGGCTATATTGAAGGCAGTATAAGCATATCTGGTTATCCCAAGAACCAAGCTACATTTGCTCGGATCAGTGGTTACTGTGAACAGAATGACATCCATTCACCATGTGTTACTGTCTATgaatctcttctcttttctgcCTGGCTCCGTCTTTCCTCAGATGTAAACAAGGAAACTCGAAAGATGTTTGTTGAAGAGGTCATGGGGTTGGTTGAGCTAAACCCGTTGAGAAACGCTCTAGTTGGTCTTCCGGGAGTGGATGGTCTGTCGACTGAGCAGAGAAAGAGGCTAACCATTGCTGTAGAGTTGGTTGCTAATCCCTCCATTATCTTTATGGATGAGCCCACATCAGGGCTTGACGCCAGAGCCGCTGCAATTGTTATGCGTACTGTGAGGAACACAGTAGATACTGGAAGAACTGTTGTCTGCACAATCCACCAACCAAGTATTGATATATTTGAAGCTTTTGATGAGCTTCTTCTGATGAAAAGAGGAGGAAGAGTTATTTATACTGGACCTCTTGGTCATCATTCTCACAAGCTTATAGAATATTTTGAGGCCATTCCAGGGGTTCCAAAGATTAAGGAGGGTAACAATCCCGCTACCTGGATGTTAGAGGTGAGCACTAGTGCAGTTGAGGCTCAGCTTAATATTGACTTTGCCGATGTTTATGCCACTTCTGAGCTTTATAGGAGAAATCAACAACTTATAGAGGAACTAAGCACTCCACCAGCGGGTTCGGAGGATCTTCACTTTCGCACCAAATACTCCCAGAATTTCATTACTCAATGCTTGGCTTGTTTCTGGAAACAACATTGGTCATATTGGAGGAATCCACAATTTAATGCCATCCGGTTTATCATCTCAATTGCGCTGGGCGTTGGTTTTGGTGTGATCTTTTGGAACAAAGGGGAGAAATCGGAAAAGCAACAAGATCTGTCTAATCTTCTTGGTGCCACCTATTCTGctgttctttttcttggagCTACCAATTGTTTTTCTGTGCAACCAGTTGTGTCAGTTGAGAGAACAGTCTTCTATCGTGAAAGAGCTGCAGGGATGTATTCGGAGATGCCTTATGCCATAGCCCAGTTAGCCATTGAGATGATTTATGTTGCAATCCAATCCATTATCTTCGTCCTGATACTGTACTCTATGATTGGATACAACTGGGATGTTGGCAAGTTCTTCTATTTCTACTACTTCATATTCATGTGCATGACCTATTACTCATTGTTTGGGATGGCGACAATTGCCTTGACTCCTGGTCAACAATTTGCATCCATTCTTATGGTCTTCTTCGTTACCTTCTGGAACTTGTTCTGTGGTTTCGTGATCCCTAGGCCGCTTATTCCAGTATGGTGGAGATGGTACTACTGGGGTTCTCCTCTTTCATGGACACTCTATGGCATTTTCGCATCACAATTTGGTGATGTCAAGACCATGGTTCAAATTCCTGGCGAAGAACCAAAGGCAATAAAAGCTTACCTCAAAGATTCGCTGGGTTTTGATCATGACTTCCTTGTACCTGTAGTCTTGGCTCATGTGGGTTGGGTTATCCTGTTCGTGTTATTGTTTACCTATTGCATCAAATTCATCAACTTCCAAAAGAGATG 3050 0.4289 MAAAVVSRQLSGSSGWRSRSLKEMWNEPDVFRRSSQRVVEDDEEELKWAELERLPTYDRMRKGILKQVTGSGRVVHDEVDVAKLGPQDKQLLMESILKIAEQDNERFLRRLRSRIDRVGIEIPQIEVRYEHLSIEGEAYVGTRALPTLLNTTLNTVEEFLGMVGLSPPKKRVIKILQDVSGIIKPSRMTLLLGPPGAGKTTLLKALAGKIDKDLKVCFLMGDYLFFKQLLAFIAVHQMAISLFRFIAAVCRTQTVANSFGFFALTIVFVLGGFVISKDDIPSWLLWSYYTLPMMYGQNAIAINEFLDDRWSTPTTNNSQPTVGKTLLDVRGLFLTESWYWISIGALFGFSIVYNILFIVVLTYLNPSGDNKHILDDDSGSDSMRKGTSNPEGFSARVTNPQPKRGMVLPFQPLSLAFNHVNYYVDMPQEMKSQGVEESRLHLLKDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTSGYIEGSISISGYPKNQATFARISGYCEQNDIHSPCVTVYESLLFSAWLRLSSDVNKETRKMFVEEVMGLVELNPLRNALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYTGPLGHHSHKLIEYFEAIPGVPKIKEGNNPATWMLEVSTSAVEAQLNIDFADVYATSELYRRNQQLIEELSTPPAGSEDLHFRTKYSQNFITQCLACFWKQHWSYWRNPQFNAIRFIISIALGVGFGVIFWNKGEKSEKQQDLSNLLGATYSAVLFLGATNCFSVQPVVSVERTVFYRERAAGMYSEMPYAIAQLAIEMIYVAIQSIIFVLILYSMIGYNWDVGKFFYFYYFIFMCMTYYSLFGMATIALTPGQQFASILMVFFVTFWNLFCGFVIPRPLIPVWWRWYYWGSPLSWTLYGIFASQFGDVKTMVQIPGEEPKAIKAYLKDSLGFDHDFLVPVVLAHVGWVILFVLLFTYCIKFINFQKR 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00359 1016 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 224 1016 - -
Bva09g00359 1016 Pfam ABC-2 type transporter 740 954 IPR013525 GO:0016020|GO:0140359
Bva09g00359 1016 Pfam ABC-2 type transporter 219 305 IPR013525 GO:0016020|GO:0140359
Bva09g00359 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 654 IPR027417 -
Bva09g00359 1016 Pfam ABC-transporter N-terminal 95 150 IPR029481 -
Bva09g00359 1016 Pfam ABC-2 type transporter 624 692 IPR043926 GO:0140359
Bva09g00359 1016 CDD ABCG_PDR_domain2 412 650 IPR034003 -
Bva09g00359 1016 Pfam Plant PDR ABC transporter associated 310 373 IPR013581 -
Bva09g00359 1016 MobiDBLite consensus disorder prediction 375 398 - -
Bva09g00359 1016 Pfam ABC transporter 176 212 IPR003439 GO:0005524
Bva09g00359 1016 PANTHER ATP-BINDING CASSETTE TRANSPORTER 224 1016 - -
Bva09g00359 1016 PANTHER ATP-BINDING CASSETTE TRANSPORTER 11 217 - -
Bva09g00359 1016 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 11 217 - -
Bva09g00359 1016 Gene3D - 429 663 IPR027417 -
Bva09g00359 1016 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 424 667 IPR003439 GO:0005524
Bva09g00359 1016 Pfam ABC transporter 443 595 IPR003439 GO:0005524
Bva09g00359 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 225 IPR027417 -
Bva09g00359 1016 Gene3D - 157 264 IPR027417 -
Bva09g00359 1016 SMART AAA_5 185 362 IPR003593 -
Bva09g00359 1016 SMART AAA_5 452 644 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00359 Bva-Chr9 1908102 1914736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00359 440 666 Calmodulin-binding Proteins AT2G36910 25.751 1.23e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00359 K08711 - sind:105170794 1228.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00359 09 1908102 1914736 Bva09g00359 09 1908102 1914736 ECH