Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00358 ATGGAGGCTGCTGTCATTTCAAGGCAGTTGAGTGGTTCCTCAGGATGGCGGTCGATGAGCGTGAGAGAAATGTGGAAGGAAGCTGACGCGTTCCGGCGGAGTTCACAGAGGGTGGTGGAGGATGACGAAGAAGAACTGAAGTGGGCGGCAATAGAGAGGCTACCAACTTATGATAGAATGAGGAAAGGGATATTGAAGCAGGTGACTGGCTCTGGTAGGGTGGTTCATGATGACGTTGATGTTGCAAAGCTTGGGTCTCAAGATAAGCAGCTCTTGATGGAGAGCATTCTTAAGGTTGCTGAACAAGACAACGAGAGGTTCCTTAGGAGGCTGAGAGGCAGAATTGACAGGGTGGGAATTGAGATTCCGAAAATTGAAGTCAGATATGAGCACTTGTCTATAGAAGGAGAAGCACACGTTGGGACCAGAGCACTTCCAACTCTGCTTAACACCACCTTGAATACAGTGGAGGAAATTCTTGGGAAGGTTGGTCTCTCTCCTTCAAAGAAAAGAGTCATTAAGATACTTCAGGACGTAAGCGGGATAATAAAACCATCAAGGATGACACTTCTTCTTGGGCATCCTGGCGCAGGAAAAACAACGTTATTAAAGGCACTAGCAGCAAAACTTGATAATGATCTGAAGGGTATCTCTGGGGGACAAAAGAAGCGCATAACTACCGGAGAAATGTTGGTTGGAAATGCAAAAGCATTTTTCATGGATGAGATATCAACAGGGTTGGACACTGCAAGTAGGTTTTTTAAACAACTGTTGGCATTCTTTGGCATACACCAGATGGCACTTTCTCTTTTCCGCTTCATCGCAGGCGCTAGCAGAACACAGATTATTGCCAATTCATTTGGTTTCCTTGTCCTGATGATAGTGTTTGTTCTAGGAGATGACATCCAATCATGGTTGATCTGGGCCTACTACATCTCTCCGATGATGTATGGACAAAATGCTATTGCTATAAATGAGTTTTTGGATGATAGATGGAGCACACGTACGACCAATTCCAGCCAACCCACGGTTGGAAAGACCCTTCTCCATGATAGAGGCTTGTTTTTGACAGAATCATGGTATTGGATTAGCATTGGGgcactttttggtttttctataCTTTTCAATATTCTCTTCATTGCAGCACTGACATATTTAAATCCAATTGGTGATAACAAACATATGATTTTGAACGATGACTCTGAATGTGATAGGATGCGAAAGGAAACATCGAATCCAGATGGTATTGATATGCCAGTGAGAAATAATAACTCCACTGATGGTGTTACAAATCCTCAAACAAAAAGAGGAATGGTTCTGCCCTTCCAACCACTTTCACTTGCTTTCAACCATGTGAACTACTATGTGGATATGCCTCAAGAGATGAAGAGCCAAGGGGTTGAAGAGAGTCGATTGCATCTGCTAAAAGATGTTAGTGGCGCTTTTAGGCCAGGTGTCCTAACAGCACTAGTTGGGGTCAGTGGAGCTGGAAAGACCACTTTGATGGATGTCCTAGCAGGGAGAAAAACCAGTGGCTATATTGAAGGCAGTATAAGCATATCTGGTTATCCCAAGAACCAAGCTACATTTGCTCGGATCAGTGGTTACTGTGAACAGAATGACATCCATTCACCATGTGTTACTGTCTATgaatctcttctcttttctgcCTGGCTCCGTCTTTCCTCAGATGTAAACAAGGAAACTCGAAAGATGTTTGTTGAAGAGGTCATGGGGTTGGTTGAGCTAAACCCGTTGAGAAACGCTCTAGTTGGTCTTCCGGGAGTGGATGGTCTGTCGACTGAGCAGAGAAAGAGGCTAACCATTGCTGTAGAGTTGGTTGCTAATCCCTCCATTATCTTTATGGATGAGCCCACATCAGGGCTTGACGCCAGAGCCGCTGCAATTGTTATGCGTACTGTGAGGAACACAGTAGATACTGGAAGAACTGTTGTCTGCACAATCCACCAACCAAGTATTGATATATTTGAAGCTTTTGATGAGCTCCTTTTGTTGAAAAGAGGAGGAAGAGTGATTTATGCTGGACCTCTTGGCCATCATTCTCACAAGCTTATAGAATATTTTGAGGCCATTCCAGGGGTTCCAAAGATTAAGGAGGGTAACAATCCCGCTACCTGGATGTTAGAGGTGAGCACTAGTGCAGTTGAGGCTCAACTTAATATTGACTTTGCCGATGTTTATGCCAATTCTGAGCTTTATAGGAGAAATCAACAACTTATAGAGGAACTAAGCACTCCGCCACCAGGTTCAGAGGATCTTCACTTCCCCACCAAATACTATCAGAATTTCATTACTCAATGCTTGGCTTGTTTCTGGAAACAACATTGGTCATATTGGAGGAATTCACAATTTAATGCCGTCCGATTTTTCACGACAATTTCGATTGGCATTAGTTTTGGTGTGATCTTTTGGAGCACAGGGGAGAAATTAGACAAACAACAAGATCTGATTAATCTTTTTGGTGCGACCTACGCTGCTATTCTTTTTCTCGGAGCTAACAATTGTTCTGCTGTTCAACCGGTTGTTTCAATTGAGAGAACAGTCTTCTATCGCGAAAGAGCTGCAGGGATGTATTCGGAAATGCCTTACGCCTTAGCCCAGCTAGCTATTGAGATGATTTATGTTGCAATCCAAACCATTATCTACACCCTTTTACTGTACTCAATGATTGGATACAACTGGGATGCTGGAAAgttcttctatttctattaCTTCGTATTCATGTGCTTCACCTACTTCTCATTGTATGGAATGACGGTGATTGCCTTGACTCTTGGTCAACAAATTGCAGCCATTCTTATGGCTTTCTTCATGAACTTCTGGAATTTGTTCTCTGGTTTCTTGATCCCTAGGCCGCTTATTCCAGTATGGTGGAGATGGTACTACTGGGCTTCTCCAATTGCATGGACAATCTACGGCGTTTTCGCATCACAATTTGGTGATGTCAAAACCATGCTTGAAATTCCTGGCGACGAACCAAAGGCAGTAAATGTCTACCTCAAAGATTCTCTGGGTTTTGATCATGACTTCATTGTACCTGTAGTCTTGGCTCATGTGGGTTGGGTTATCTTGTTTATGTTAGTGTTTGCCTATTGCATTAAATTCCTCAACTTCCAAGAGAGATG 3146 0.4259 MEAAVISRQLSGSSGWRSMSVREMWKEADAFRRSSQRVVEDDEEELKWAAIERLPTYDRMRKGILKQVTGSGRVVHDDVDVAKLGSQDKQLLMESILKVAEQDNERFLRRLRGRIDRVGIEIPKIEVRYEHLSIEGEAHVGTRALPTLLNTTLNTVEEILGKVGLSPSKKRVIKILQDVSGIIKPSRMTLLLGHPGAGKTTLLKALAAKLDNDLKGISGGQKKRITTGEMLVGNAKAFFMDEISTGLDTASRFFKQLLAFFGIHQMALSLFRFIAGASRTQIIANSFGFLVLMIVFVLGDDIQSWLIWAYYISPMMYGQNAIAINEFLDDRWSTRTTNSSQPTVGKTLLHDRGLFLTESWYWISIGALFGFSILFNILFIAALTYLNPIGDNKHMILNDDSECDRMRKETSNPDGIDMPVRNNNSTDGVTNPQTKRGMVLPFQPLSLAFNHVNYYVDMPQEMKSQGVEESRLHLLKDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTSGYIEGSISISGYPKNQATFARISGYCEQNDIHSPCVTVYESLLFSAWLRLSSDVNKETRKMFVEEVMGLVELNPLRNALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHHSHKLIEYFEAIPGVPKIKEGNNPATWMLEVSTSAVEAQLNIDFADVYANSELYRRNQQLIEELSTPPPGSEDLHFPTKYYQNFITQCLACFWKQHWSYWRNSQFNAVRFFTTISIGISFGVIFWSTGEKLDKQQDLINLFGATYAAILFLGANNCSAVQPVVSIERTVFYRERAAGMYSEMPYALAQLAIEMIYVAIQTIIYTLLLYSMIGYNWDAGKFFYFYYFVFMCFTYFSLYGMTVIALTLGQQIAAILMAFFMNFWNLFSGFLIPRPLIPVWWRWYYWASPIAWTIYGVFASQFGDVKTMLEIPGDEPKAVNVYLKDSLGFDHDFIVPVVLAHVGWVILFMLVFAYCIKFLNFQER 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00358 1048 Pfam ABC-2 type transporter 245 327 IPR013525 GO:0016020|GO:0140359
Bva09g00358 1048 Pfam ABC-2 type transporter 772 986 IPR013525 GO:0016020|GO:0140359
Bva09g00358 1048 MobiDBLite consensus disorder prediction 406 434 - -
Bva09g00358 1048 Gene3D - 461 695 IPR027417 -
Bva09g00358 1048 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 249 1048 - -
Bva09g00358 1048 Pfam Plant PDR ABC transporter associated 332 396 IPR013581 -
Bva09g00358 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 685 IPR027417 -
Bva09g00358 1048 Gene3D - 142 210 IPR027417 -
Bva09g00358 1048 Gene3D - 211 263 IPR027417 -
Bva09g00358 1048 MobiDBLite consensus disorder prediction 416 434 - -
Bva09g00358 1048 CDD ABCG_PDR_domain2 444 682 IPR034003 -
Bva09g00358 1048 SMART AAA_5 185 288 IPR003593 -
Bva09g00358 1048 SMART AAA_5 484 676 IPR003593 -
Bva09g00358 1048 Pfam ABC-2 type transporter 656 724 IPR043926 GO:0140359
Bva09g00358 1048 Pfam ABC-transporter N-terminal 95 150 IPR029481 -
Bva09g00358 1048 PANTHER ATP-BINDING CASSETTE TRANSPORTER 11 215 - -
Bva09g00358 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 253 IPR027417 -
Bva09g00358 1048 PANTHER ATP-BINDING CASSETTE TRANSPORTER 215 250 - -
Bva09g00358 1048 PANTHER ATP-BINDING CASSETTE TRANSPORTER 249 1048 - -
Bva09g00358 1048 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 215 250 - -
Bva09g00358 1048 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 11 215 - -
Bva09g00358 1048 Pfam ABC transporter 475 627 IPR003439 GO:0005524
Bva09g00358 1048 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 456 699 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00358 Bva-Chr9 1900759 1906924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00358 472 698 Calmodulin-binding Proteins AT2G36910 25.751 1.28e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00358 K08711 - sind:105170794 1283.47