Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00357 ATGGATGAGGATGACAGTGCATCTGCCACCATGGCAGAGACACATGGAGCTTTAAACCCTAGCGGCAGAGGACGAGAAAAGAAGCGGGAAGTGGTAGTGATAATGGGCCCCACTGGTTCTGGGAAGTCCAAGCTTGCCATTGATTTGTCTTCCCACTTCCCAATCGAAGTTATCAATGCTGATGCCATGCAGGTCTACCGAGGCCTCGATGTTCTCACTAATAAAGTTCCACACTCTGATCAAAGGGGAGTACCGCATCATCTGTTGGGTAGTATAAGCCCAAACGTGGAATTCACAGCCAAAGAATTTCGGGATTCTGCTATTCCTctgATCAACGAAATATTGGCGCGAAACTGCCTACCTGTCATAGTTGGGGGTACTAATTACTATATCCAGgCTCTTGTGAGTCCATTCCTTCTAGACGATTCAGCGGAAGATATGGATAAAAGTTGTTTGTGCAGTCCTCCTGGAACTACCCCATCAGATAACCACTTCATCCCAGTAGAAGACAGCTCAAATGACAGTTATGATCTGCTTAAAGTTATTGACCCAGCTGCAGCTAATAGAATCCATCCAAATAACCACAGAAAGATAAGTCATTATCTTAGTTTGTATGCTCGCTCTGGTGTTCTTCCCAGCACACTTTTCCAAGGACAGGCTGCAGAGAACTGGGGTCGAGTTGATAATTTAAGATATGATTGCTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTGGATAGATATGTGGAACAGCGAGTAGATTGCATGATGGACGCTGGATTACTTAATGAAGTCTATGACATCTACAATCTGAATGCTGATTATACTCGAGGTTTGCGGCAGGCCATAGGTGTCCGTGAATTTGAGCCTCTTCTTAGAACTTGTATTGTTAAAGACTTATGCAAAAGAGATAAGGAATTGTCCGAAGGAACCAGCTCTGTGAGGTCAATGGACATGAGCGGTCAGTCATTTGACAAGAATCTGAGGGAGTGCTTGAGCTCTTCTTGTGATACTCAATCCTTAATTCTTTTGGAAGAAGCAATAGAAAAAGTAAAGGTTAATACCCGGAGACTTGTTCGCCGCCAGAAGAGGATGCTTAATCGACTACAAACGTTGTTTGGTTGGAATATGCATTTTGTTGATTCCACAGAATCAATATCAAGCAAATCAGAAGACATATGGGCCAACCAAGTGGTTGAACCTGCCATGAAGATAGTTACATCTTTCCTCTCTAAGGATGGAAACCTGTCAAATAGCAGTGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAAATAAAGTGCTTAGAGGATTACATGAGTGGGAACAACATAAACAGGGTCGCGGGCACAGGAAGCGCATTTCCAGTCTCAAGAGTAAATCTGAAGCTCTTAGTTTGGCACAACAGAAGCAGCAATCCTCCTA 1451 0.4356 MDEDDSASATMAETHGALNPSGRGREKKREVVVIMGPTGSGKSKLAIDLSSHFPIEVINADAMQVYRGLDVLTNKVPHSDQRGVPHHLLGSISPNVEFTAKEFRDSAIPLINEILARNCLPVIVGGTNYYIQALVSPFLLDDSAEDMDKSCLCSPPGTTPSDNHFIPVEDSSNDSYDLLKVIDPAAANRIHPNNHRKISHYLSLYARSGVLPSTLFQGQAAENWGRVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYNLNADYTRGLRQAIGVREFEPLLRTCIVKDLCKRDKELSEGTSSVRSMDMSGQSFDKNLRECLSSSCDTQSLILLEEAIEKVKVNTRRLVRRQKRMLNRLQTLFGWNMHFVDSTESISSKSEDIWANQVVEPAMKIVTSFLSKDGNLSNSSGMKIIQRDLWTQYICKACGNKVLRGLHEWEQHKQGRGHRKRISSLKSKSEALSLAQQKQQSS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00357 483 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 414 IPR039657 -
Bva09g00357 483 Gene3D - 168 220 - -
Bva09g00357 483 TIGRFAM miaA: tRNA dimethylallyltransferase 31 297 IPR018022 GO:0008033
Bva09g00357 483 MobiDBLite consensus disorder prediction 468 483 - -
Bva09g00357 483 Gene3D - 28 431 IPR027417 -
Bva09g00357 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 273 IPR027417 -
Bva09g00357 483 Gene3D Classic Zinc Finger 432 474 - -
Bva09g00357 483 Hamap tRNA dimethylallyltransferase [miaA]. 31 392 IPR018022 GO:0008033
Bva09g00357 483 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 414 - -
Bva09g00357 483 MobiDBLite consensus disorder prediction 455 483 - -
Bva09g00357 483 Pfam IPP transferase 64 365 - -
Bva09g00357 483 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00357 Bva-Chr9 1894549 1898978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00357 18 468 C2H2 Transcription Factor Family AT2G27760 56.522 1.74e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00357 K00791 - gmx:100792690 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00357 09 1894549 1898978 Bva09g00357 09 1894549 1898978 ECH