Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00338 ATGGAAAACCAAATTACTAGTAATGTCACTGATCAGTCTCCGACAGCCACCAACCAGAACGAGCCATCTAGGACGCCGGTCTTGGAACAGAAAACGAACGGTCATGTTGACATTAAGGTTAACGACTCCGAAGCCTTGGCTGATCATGTGAATGGAGAAGCTGTTGGAGGTGACGAGTTAGCTGCCGAACCAGGATCCGGTTCCGAGCAGGTTCAGGTTCAGAAGAGACGTGGCAGACCTAAAAAGCACGACGGTGATGGCAACTTCCAACCATGTGAAAGCTCTACTAAGAAGAGCAGAGGCCGGCCACGTGGCTCCGGCAGACTGCAACTGCTGGCTTCCGGTGGCTTTGTTGCTGAGACAGCTGAGGGAAGCTTCGCCCCTTGTTTTTTGACAGTGCCTATAGGGGAGGATGTGATGGGCATGTTAGAATCATTCTCTGAGAGAAGCACTCAATCGGTTTGCACGATCTCAGCCACCGGTGCTATCTCCAGTGTGGTACTTGCCCTCGCTTCTGGACCTACTTTGGCATTTGAGGGCCCTTTTGagatattgtatttttctgGAGCATATGCTTATACGTGTGGTGGCATTGGCGGTGCACAACACAAAAAGGGCACTTTTAGCGTTTTACTGGCTAAGCCCGATGGCAATGTATTTGGTGGACGCGTTGCTGGCCCAATGATAGCGGCTGTTCCCATCCAACTAGTTGTTGGGTCTTTCAAGCAAAACCTTAGTAAGCAAATGAGAAGGAAGTGCCAAGGTGAAGGCTGTAGTTCTCGCAAACGGCCTGCAGGTGATCCAGACACGGCAACCACGGCAAAGGTTCTGAAACCAGAGCCTAACATCATAGAAGATGAACAGAAATGTGCTTCACCAACTTCTGGACTTGTGCCGATAACAGCAACAAGTACTATTAATGGCGTAGCAGATAATGCAAACCAGAATATGCATCCTCCTGCAGTTGCTTTAAATTGTGTTGGTCTGGAAACTTTGGACGGTGGGGACCTGAAGCCCATAATAGATCAGATAAACGGTGTCCAAGAGATATG 1052 0.4867 MENQITSNVTDQSPTATNQNEPSRTPVLEQKTNGHVDIKVNDSEALADHVNGEAVGGDELAAEPGSGSEQVQVQKRRGRPKKHDGDGNFQPCESSTKKSRGRPRGSGRLQLLASGGFVAETAEGSFAPCFLTVPIGEDVMGMLESFSERSTQSVCTISATGAISSVVLALASGPTLAFEGPFEILYFSGAYAYTCGGIGGAQHKKGTFSVLLAKPDGNVFGGRVAGPMIAAVPIQLVVGSFKQNLSKQMRRKCQGEGCSSRKRPAGDPDTATTAKVLKPEPNIIEDEQKCASPTSGLVPITATSTINGVADNANQNMHPPAVALNCVGLETLDGGDLKPIIDQINGVQEI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00338 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 246 - -
Bva09g00338 350 MobiDBLite consensus disorder prediction 1 30 - -
Bva09g00338 350 Gene3D - 129 257 - -
Bva09g00338 350 PANTHER DUF296 DOMAIN PROTEIN 19 317 - -
Bva09g00338 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 317 IPR039605 GO:0003680
Bva09g00338 350 MobiDBLite consensus disorder prediction 1 106 - -
Bva09g00338 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 242 IPR005175 -
Bva09g00338 350 CDD DUF296 131 241 IPR005175 -
Bva09g00338 350 ProSiteProfiles PPC domain profile profile. 123 264 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00338 Bva-Chr9 1761230 1763640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00338 57 260 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 38.767 2.42e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00338 - - zju:107410591 189.889