Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00328 ATGGCTTCAACTTGGCCGCAACTACTCCTGTTTCACTCTCATTCTTCCTTCAGAGCCACCAACTCCGTCCTATTCTCCGATCTTACTGATGCTCACTCTGTTGAAACGCCATGGCTCACTTATTTGACTCTAGTCCACCGGAGCAAGATCTCTGTCTTATCTACATCTCCGTTGACGACTAAGCTTTTGAAGCCGTCAGTGAAATGCTTCAGCAAAACGACTGAGGAGAAGCAGTGGATGGAAACGGAAACAGAAACTGCCGTGTCTGATTCCGATGAAGCCAGAGATGCAGCACGGAGTCCCATTTCTGTGGCTACAAAAGCTCGGATTGAGTATCCGCAGAGGATTATGACCACCTCCTCAGGCGATTCTCTGTCTCTAGGAATTCGGGAACCGGTTTACGAGGTTATAGAAGTAAAGTCAGATGGGATGGTTTCAACTAGAAAAATCAGCAGGAGACAACTATTGAAGTCAAGTGGTCTTCGTCCACGAGATATTCGAAGTGTGGATCCATCATTGTTTTTGACGAATTCAGTGCCTTCTTTACTGGTTCGTGAGTACGCTATACTTCTAAACTTGGGTTCACTGCGAGCCATAGCAATGCAAGAGCGTGTACTTATATTTGACCATGATCgtaaAGGAGGGAAAGCTTTTCTAAAGTCATTGTTGCCTCGGTTGAACCCCAAGAACAACAACGGAGGGCAATCCATGCCATTTGAGCTGGAGGTTGTTGAAGCAGCGTTGCTCTCAAGAATTCAGCGTTATGAGCAAAGACTGATGGAGTTAGAACCTCGTGTTCAAGCTCTTCTTGATGTTTTGCCAAATCGATTAAGTGGTGACATGTTGGAGCAACTTCGGATTAGCAAGCAACATTTGGTTGAGTTGGGTTCTAGGGCAGGAGCTCTCGGACAAATGTTGCTTGACCTTTTGGAGGACCCTGAAGAAATACGCCGTATATGTATTATGGGGAAAAACTGCACTCTTAAGAAAGGAGATGATAATCTGGAATGCTCGACGCCCTTGGAAAAGCAGATTGCCGAGGAAGAGGAGGAGGAAATAGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGACTCTGCAAGGGAAATGGAAGATTCTATTGCTGTCAATTTGAGTTCACGAAGGCTCGAGGTTAGCAGAGTGGAACTGCTTCTTCAGGTTGGAACATTCTGTGTGGGAGTTGGTGCCCTTATAGCAGGCATATTTGGCATGAACCTAAAATCCTATATCGAAGAACATGTGTTTGCCTTTTGGCTGACAACAGCTGGCATAATTGTTGGTGCTGTCATCGCTTTCTTTCTTATGTATTCCTATGTCAGGACAAGGAAAATACTGTG 1391 0.4493 MASTWPQLLLFHSHSSFRATNSVLFSDLTDAHSVETPWLTYLTLVHRSKISVLSTSPLTTKLLKPSVKCFSKTTEEKQWMETETETAVSDSDEARDAARSPISVATKARIEYPQRIMTTSSGDSLSLGIREPVYEVIEVKSDGMVSTRKISRRQLLKSSGLRPRDIRSVDPSLFLTNSVPSLLVREYAILLNLGSLRAIAMQERVLIFDHDRKGGKAFLKSLLPRLNPKNNNGGQSMPFELEVVEAALLSRIQRYEQRLMELEPRVQALLDVLPNRLSGDMLEQLRISKQHLVELGSRAGALGQMLLDLLEDPEEIRRICIMGKNCTLKKGDDNLECSTPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVGVGALIAGIFGMNLKSYIEEHVFAFWLTTAGIIVGAVIAFFLMYSYVRTRKIL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00328 463 Coils Coil 343 363 - -
Bva09g00328 463 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 66 463 IPR039204 -
Bva09g00328 463 Pfam CorA-like Mg2+ transporter protein 243 453 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bva09g00328 463 CDD Mrs2_Mfm1p-like 136 462 IPR039204 -
Bva09g00328 463 Gene3D - 129 210 - -
Bva09g00328 463 Gene3D Magnesium transport protein CorA, transmembrane region 211 394 - -
Bva09g00328 463 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 66 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00328 Bva-Chr9 1694795 1700261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00328 19 463 MRS2 Gene Family AT5G22830 67.329 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00328 K16075 - gmx:100808371 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00328 09 1694795 1700261 Bva09g00328 09 1694795 1700261 ECH