Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00327 ATGGCGGAGGACCGGAACGGCGATAGGAATGAGGGCAGCGATTATACTTCAGAGGACGAAGGAACTGAGGATTACAGACGAGGAGGATACCATGCGGTTCGAATTGGCGATACTTTCAAAAATGGGTGTTACGTAATACAAAGCAAGCTTGGCTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGATACTCAGAGATTGCATTATGTAGctctaaaaattcaaaagagtGCTCAGCACTACACTGAGGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAGGAGGATGCAGAGGACAAGAAGTGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGACCTAATGGCCAGCATGTGTGTAtggtttttgaatttttgggtgACAATCTTCTGACCCTAATAAAGTACAGTGATTACCGAGGGGTTCCTCTCTCCATGGTTAAAGAGAtttgtttccatattttgGTGGGTTTGGATTACTTGCATCGTGAGCTTTCTATAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCAATGATTGATCCGTCTAAGGATCCTAGAAGATCTGGGGCTTCACTTATCCTCCCAAACACTAGGGACAATACTTTGACcacaaaagaccaaaaaagttTGAATGGAGATCTGACTAAgaaccagaaaaagaaaatgcggAAAAGGGCTAAGAAGGCAGCTCAAGGTGGTGCTGGGAAGGAAACACCCGAGGAAGCTGAGGAGGATTCTAAAGCACCTGACAAAGAAGATTCTAGTAATGGTGTGAAATTAACTGGGATAGCTGTTGAGGATCAACCTTATACTTCTTTGAGCAAAGATGAATCAGCAAAGACTGATAGTCCTGTGAGTAGAGATGAACCAGTTAAGATTGTTGAAGTTAAGGATGTTCCCGAAGGAACTCATGGTCATAGGAGACCTAGTCGTTCCACAAGGAAGAAGTTGCTTGCAGCTGTTGATCTCAAATGCAAGCTGGTCGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAGTACAGGTGTCCTGAGGTTATTCTTGGATCAAAGTACTCCACATCAGCAGATCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCCCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTCGGAATGATGCCTCGCAAGATTGCACTAGGTGGCCGCTATTCCCGGGAATTTTTCAATAGATATGGTGACTTGAGGCACATCCGTCGGTTGCGATTCTGGCCTCTTAATAAAGTGTTGATGGAGAAGTATGATTTCAGCGAGCAAGATGTGAATGACATGGCTGACTTCCTTGTTCCAATGCTTGATTTTGTCCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATAAGTGCAGGTCCTCGGGTTCTTCAGCCATCCTTGACTATAACGCAATCTGAGGGAATGTCTGAAAAGATGAAGGAAAAGGCTGAGCAGGAGGCAGTGGAAGTTGGTGTGGGGAATATAGCCATTGATGCAACTCCAAAGCCACTAAAAGAGTCCCAACCTATAAAGTCGTG 1649 0.4203 MAEDRNGDRNEGSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGCYVIQSKLGWGHFSTVWLAWDTQRLHYVALKIQKSAQHYTEAAMDEIKILKQIAEEDAEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSMIDPSKDPRRSGASLILPNTRDNTLTTKDQKSLNGDLTKNQKKKMRKRAKKAAQGGAGKETPEEAEEDSKAPDKEDSSNGVKLTGIAVEDQPYTSLSKDESAKTDSPVSRDEPVKIVEVKDVPEGTHGHRRPSRSTRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEQDVNDMADFLVPMLDFVPEKRPTAAQCLNHPWISAGPRVLQPSLTITQSEGMSEKMKEKAEQEAVEVGVGNIAIDATPKPLKESQPIKS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00327 549 ProSiteProfiles Protein kinase domain profile. 44 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00327 549 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 547 - -
Bva09g00327 549 CDD STKc_SRPK 33 493 - -
Bva09g00327 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bva09g00327 549 SUPERFAMILY Protein kinase-like (PK-like) 39 504 IPR011009 -
Bva09g00327 549 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Bva09g00327 549 MobiDBLite consensus disorder prediction 201 219 - -
Bva09g00327 549 Gene3D Transferase(Phosphotransferase) domain 1 127 494 - -
Bva09g00327 549 MobiDBLite consensus disorder prediction 1 23 - -
Bva09g00327 549 PANTHER SERINE KINASE-LIKE PROTEIN 11 547 - -
Bva09g00327 549 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Bva09g00327 549 MobiDBLite consensus disorder prediction 193 298 - -
Bva09g00327 549 SMART serkin_6 44 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00327 549 MobiDBLite consensus disorder prediction 245 262 - -
Bva09g00327 549 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00327 549 Pfam Protein kinase domain 330 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00327 Bva-Chr9 1691002 1694645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00327 1 539 EF-hand Containing Proteins AT5G22840 64.835 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bva09g00327 Pkinase 8.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00327 K08832 - gmx:100791829 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00327 09 1691002 1694645 Bva07g02317 07 19013897 19017508 BWGD
Bva09g00327 09 1691002 1694645 Bva09g00327 09 1691002 1694645 ECH