Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00316 ATGGGACTCCAAAATCGGAGACTACTACTACTCGACGACGATATACCCGCCTCCACCGTATCTCCTCTACCTCTCATCCAAACCAATCAAACGGAAACCACCACAACCGATAACTCATCCTCACCACCACAATCAATGCCCAGATCATCGTCAACACCGCCATCAAGATTGCCGCCGAGTCCAGTTTTGGACGCCAACGTTGCTTACACCATGCTTGTCCTCCTCACCGCCCTCTTCTTCCTGGGTTTCATCTCCAACTACATCCGTCACTTCACCGAGGAGTCCGCCGCTCTACGACGTCGCCGCCGCCCATCGACTCACATGTCTTGGAATTATTATTCCTCGTCATCGTGCTACGGAGGAGTCGACCCCGCTACCATCCAATCCCTGCCGGTGTTTAAGTACCACAGTGACGTTAAGCAACGGCAGCAGCAGCTTGAACTTGACTGTGCGATTTGTCTAAGTGAATTTCAGGAGGGTGAAATCCTTAAGGTGATTCCATACTGTGAGCACGTGTTTCATCCCGAATGTATTGATATGTGGCTCGCGTCACACGTGACATGTCCGGTCTGCCGGTCCACCATGTTTCTTCAGAGGAAAGGTAATGGCGACGGAGGCTTAGGTACCGTAGACAAGAGAGGAGCTCAGGCCCAGGGTGTGGGTAGCCATCGACAAGGATCGACGGTCGAGAATGGCATGACGTGTAGGCATGATGGAGAGGTAGGGTCACACAGTGAGCGCAGGACTGGTAGTTGGTCCAACTCAGAAGGCGGTAGTGGTAGACTGATGTTACGAAGAACATTGAGTATCTG 812 0.5234 MGLQNRRLLLLDDDIPASTVSPLPLIQTNQTETTTTDNSSSPPQSMPRSSSTPPSRLPPSPVLDANVAYTMLVLLTALFFLGFISNYIRHFTEESAALRRRRRPSTHMSWNYYSSSSCYGGVDPATIQSLPVFKYHSDVKQRQQQLELDCAICLSEFQEGEILKVIPYCEHVFHPECIDMWLASHVTCPVCRSTMFLQRKGNGDGGLGTVDKRGAQAQGVGSHRQGSTVENGMTCRHDGEVGSHSERRTGSWSNSEGGSGRLMLRRTLSI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00316 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 196 IPR013083 -
Bva09g00316 270 CDD RING-H2_EL5_like 149 192 - -
Bva09g00316 270 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 63 230 - -
Bva09g00316 270 MobiDBLite consensus disorder prediction 215 259 - -
Bva09g00316 270 SMART ring_2 150 191 IPR001841 -
Bva09g00316 270 MobiDBLite consensus disorder prediction 21 46 - -
Bva09g00316 270 SUPERFAMILY RING/U-box 128 199 - -
Bva09g00316 270 MobiDBLite consensus disorder prediction 21 58 - -
Bva09g00316 270 Pfam Ring finger domain 149 192 IPR001841 -
Bva09g00316 270 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Bva09g00316 270 PANTHER RING FINGER DOMAIN-CONTAINING 63 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00316 Bva-Chr9 1642404 1643788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00316 63 203 C3H Transcription Factor Family AT2G27940 44.737 2.16e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00316 - K10664 nnu:104604593 158.303