Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00312 ATGGGTCAGATCCAGTACTCCGAGAAGTACTTCGACGATACTTACGAGTATAGGCATGTGGTTCTGCCTCCTGAAGTGGCAAAATTACTCCCAAAGAATCGACTTCTTACTGAAAATGAGTGGCGTGCAATGGGGGTGCAGCAGAGCCGTGGTTGGGTTCACTACGCCATTCATCGCCCAGAGCCACACATCATGCTCTTCAGGAGGCCTCTGAACTATCAGCAGCAGCAGGAAAACCAGGCCCAGCAAAGCATGCTTGCCAACTTCCAGGGTTCACTTCTCCGGCATTGGCACCCAGCATTATTGGCCAGTCGAAGCGAGTTAAGTCATTTTCGCTTCAATTCAGACCACATTGCTGCTACTTTGCTTACATCCATGTCTCAAGCCCGCAATCTGGTGGTTGCTGGTGGTTTATTAGCTTTTGCTGGAGCAGGGTTGGCATTTCCTTTCTATATGGCGTCATCAAAGAAGCCTGTTATTGATCCATCAAAGCCTCTGCCGCCGCAAGCAACTTTTCGAGGGCCTTACATAAACACAGGCTCGCGGGACGTTGGTCCTGATTTTGAAACGTATCAGAAGAAATG 584 0.4949 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLTENEWRAMGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQSMLANFQGSLLRHWHPALLASRSELSHFRFNSDHIAATLLTSMSQARNLVVAGGLLAFAGAGLAFPFYMASSKKPVIDPSKPLPPQATFRGPYINTGSRDVGPDFETYQKK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00312 194 SMART CKS_2 3 72 IPR000789 GO:0016538
Bva09g00312 194 Gene3D - 1 84 IPR036858 GO:0016538
Bva09g00312 194 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 88 - -
Bva09g00312 194 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Bva09g00312 194 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Bva09g00312 194 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Bva09g00312 194 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Bva09g00312 194 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Bva09g00312 194 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 88 - -
Bva09g00312 194 MobiDBLite consensus disorder prediction 170 194 - -
Bva09g00312 194 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Bva09g00312 194 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00312 Bva-Chr9 1616947 1619988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00312 1 82 Core Cell Cycle Gene Families AT2G27970 89.024 9.21e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00312 K02219 - tcc:18590453 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00312 09 1616947 1619988 Bva09g00312 09 1616947 1619988 ECH