Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00297 ATGGCCGCCTACAATTGGGGAAACGGTGGCCGGCGTGGTATCTGCGGCTACGAGAAGGCACTACATGTGATTGGAGGACAATGGTTCATGGTCTTCGCCTCCTTCCTCATCATGGCAGGCGCTGGCGCTACCTATCTCTTTGGAACTTATTCCAAAGCAATCAAATCTTCGCAAGGCTATGACCAGACCTCACTCAACCTCCTTGGCTTTTTCAAAGAACTCGGTGCCAATGTTGGAGTTATTTCTGGTCTCGTTGCAGAGGTAACCCCGACATGGTTTGTACTCTTAATAGGTTCAGCCATGAACTTTGTAGGCTACTTCATCATCTGGTTAGCTGTCACTGACAGAATCTCAAAACCTAAAGTTTGGCAAATGTGTCTCTACATCTGTATTGGTGCAAATTCTCAGAACTTCGCCAACACAGCTGCACTAGTACCTTGTGTCAAGAATTTCCCAGAAAGTCGTGGTCTCATGCTTGGTCTCTTGAAGGGCTACCTTGGACTCAGTGGGGCTATCATGACCCAACTGTATTTGGCCATTTACGGCGACGATTCCAAGTCTTTGATCCTTCTCATTGCTTGGCTCCCAGCTGCTATATCAGTTGTGTTTGTTTATACTATCCGGCCTATGAAGGTTGTTAGGCAGCCAAGTCAGCTCATGATCTTCAAACAATTCCTCTGTGCATCAATTGCTCTTGCGTTATTTCTCATGGCCGCGATCATTATTCAGAgacaatttgttttttcacaAGCGGCTTATGCTGGAAGTGCTACTGCGGTATGTATTCTGCTTTTCGTCCCACTGTTTATTGCTATTAGAGAGGAGATATTAATTTGGAATCTGGAGAAAAAACATGATCCTCCTCTAATTGAGTCAACCATAGAGAAAACACAAATAGTTGAATCCCAGCAAGTGAAAAAGAACTCATCCTGGTTTGCCAACATATTCGATAAACCTGAAAGAGGTGAAGACTACACTATCTTGCAAGCGCTGCTAAGCATTGACATGATAATATTGTTCATAGCCACGTTTTGTGGCTTGGGAGCGAGCTTAACAGCTTTGGACAATTTGGGGCAAATTGGTGAGTCGCTGGGATACCCTTCCAACACGGTGAGCTCATTTGTATCCCTTGTTAGCATATGGAATTACTTTGGAAGGGTCTTCTCTGGTTTTGCATCTGaaattttgcttaaaaaatacaaacttcCTCGCCCCCTCATGTTAACCTTGGTGCTTTTCTTATCATGCATTGGCCATCTACTTATTGCTTTCCCGGTGCGCGGTTCAGTTTATATGGCGTCGGTCATAATTGGATTTACCTATGGTGCACAATTGCCAGTAAATTATGCAATAGTTTCTGATCTCTTTGGCCTTAAATACTACGCCACACTCTCCAATTGTGGTCAGATTACTAGTCCTCTTGGATCATATATACTAAATGTCAAGGTAACAGGATACCTTTATGATAGGGAGGCAAGGAAGCAGCTCCAAACAAGTGGCAAGGCACTGATGAAGAGCGCTGAGCTCACTTGCTTAGGAACTGAATGCTTTAGGCTTTCTTTCATAATCATAACATTAGTCACTTTAGCTGGAGCAATCGTTTCCCTGTTTTTGGTGATGAGAACTCGAGAATTTTACAAGAGTGACATATACAAAAAGTTTAAAGAGGATGCAACAGAGGAGCTGCCTTCATCCTCTTCGTG 1703 0.4292 MAAYNWGNGGRRGICGYEKALHVIGGQWFMVFASFLIMAGAGATYLFGTYSKAIKSSQGYDQTSLNLLGFFKELGANVGVISGLVAEVTPTWFVLLIGSAMNFVGYFIIWLAVTDRISKPKVWQMCLYICIGANSQNFANTAALVPCVKNFPESRGLMLGLLKGYLGLSGAIMTQLYLAIYGDDSKSLILLIAWLPAAISVVFVYTIRPMKVVRQPSQLMIFKQFLCASIALALFLMAAIIIQRQFVFSQAAYAGSATAVCILLFVPLFIAIREEILIWNLEKKHDPPLIESTIEKTQIVESQQVKKNSSCHVLWLGSELNSFGQFGANW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00297 330 SUPERFAMILY MFS general substrate transporter 30 271 IPR036259 -
Bva09g00297 330 Pfam Nodulin-like 27 272 IPR010658 -
Bva09g00297 330 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 18 310 - -
Bva09g00297 330 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00297 Bva-Chr9 1548263 1549966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00297 21 311 Nodulin-like Gene Family AT2G28120 68.106 3.78e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00297 - - pper:18775592 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00297 09 1548263 1549966 Bva09g00297 09 1548263 1549966 ECH
Bva04g02529 04 22806397 22808244 Bva09g00297 09 1548263 1549966 ECH
Bva13g02008 13 16082667 16085989 Bva09g00297 09 1548263 1549966 ECH
Bva09g00297 09 1548263 1549966 Bva07g02347 07 19163520 19167837 ECH