Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00285 ATGGTTTCTGACGCGAGTAAGAAGAAGGCAGCACAGAAGAAGGCGGCAGCGGCTGCCAAGAGAGGAGGAaaggcggcggcggcggcggcagCTTCATCCAAAGCAGCGGAGGCCCAGAAGGCAGCTGATAAGCTAGCTAATGGAATTGGGGAAATTCAGATTTCTGATCGGACTTGCACCGGCGTCCTCTGCTCACATCCACTTTCAAGGGATATACGGATAGAGTCTCTGTCAGTGACTTTTCATGGACACGATCTCATAGTTGACTCTGAATTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGATTAAATGGGTGTGGAAAATCTACTCTGCTTACCGCAATTGGTTGCCGAGAGCTTCCAATTCCTGAACACATGGATATTTATCACCTTAGCAGAGAAATTGAAGCTTCTGACATGTCTGCATTGGAGGCTGTCATAAGTTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAAGTTGAAACTTTGGCAGCACAAGATGATGGTGGTGGAGAAGCCCTTGATCGTGTTTATGAACGATTAGAAGCCATTGATGCTTCAACTGCAGAGAAGCGTGCTGCTGAAATTTTATATGGTCTTGGTTTTAACAAGCAGATGCAAGCTAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCATTAGCACGGGCTCTATTTATGAATCCAACCATTCTCTTGCTTGATGAGCCTACAAATCACCTTGATTTGGAAGCATGCGTATGGCTGGAGgagaatttgaaaaagtttGAACGTATTTTAGTTGTGGTTTCACACTCACAGGATTTCCTTAATGGTGTCTGCACAAACATCATCCacatgcaaaacaaaaaactgaAGCTTTATACTGGTAACTACGATCAATATGTTCAAACTCGTTCTGAATTGGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAAGAACAGATTGCCTCAATGAAAGAGTATATTGCCCGATTTGGGCATGGATCGGCAAAACTAGCTCGCCAGGCACAGAGTAAAGAGAAAACGCTAGCAAAAATGGAACGAGGAGGACTTACAGAGAAGGTGATCAAGGATAAAGTTTTGGTCTTCCGTTTTGTTGATGTGGGAAAGCTTCCCCCTCCTGTTCTTCAGTTTGTTGAGGTTACATTTGGTTACACTCCTGATAACCTCATCTACAAAAATCTTGACTTTGGGGTAGATTTAGATTCAAGGATTGCACTAGTTGGACCCAATGGAGCTGGGAAGAGTACTTTACTGAAGTTAATGACAGGTGATCTGGCTCCTATTGATGGTATGGTCCGACGGCACAATCACCTTCGCATCGCACAATTCCATCAGCACTTGGCTGAGAAGCTCGACCTTGAGATGCCTGCTCTCCAATATATGATCAAAGAGTACCCTGGCAATGAGGAAGAGAGGATGAGGGCGGCTATTGGGAGATTTGGTCTGACAGGTAAGGCCCAGGTGATGCCTATGAAGAATTTGTCTGATGGGCAGAGGAGCCGGGTGATCTTTGCATGGTTAGCTTGGAGGCAGCCTCACTTGCTGCTTCTGGATGAGCCAACTAACCATTTGGATATTGAGACAATTGACTCATTAGCTGAGGCATTGAATGAATGGGACGGTGGTATGGTGCTCGTTAGTCATGATTTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTTTGTGCAGACCAAACTGTTACTAGATGGGAGGGTGACATCATGGATTTTAAGGCGCATCTAAAGGCAAGGGCTGGTTTATCTGACTG 1796 0.436 MVSDASKKKAAQKKAAAAAKRGGKAAAAAAASSKAAEAQKAADKLANGIGEIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLSREIEASDMSALEAVISCDEERLRLEKEVETLAAQDDGGGEALDRVYERLEAIDASTAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFERILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVIKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLAPIDGMVRRHNHLRIAQFHQHLAEKLDLEMPALQYMIKEYPGNEEERMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKAHLKARAGLSD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00285 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 577 IPR027417 -
Bva09g00285 598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 312 IPR003439 GO:0005524
Bva09g00285 598 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 598 - -
Bva09g00285 598 Pfam ABC transporter 283 359 IPR032781 -
Bva09g00285 598 Gene3D - 72 336 IPR027417 -
Bva09g00285 598 ProSitePatterns ABC transporters family signature. 216 230 IPR017871 GO:0005524
Bva09g00285 598 CDD ABCF_EF-3 72 289 - -
Bva09g00285 598 Pfam ABC transporter 399 530 IPR003439 GO:0005524
Bva09g00285 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 319 IPR027417 -
Bva09g00285 598 Coils Coil 290 310 - -
Bva09g00285 598 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 383 598 IPR003439 GO:0005524
Bva09g00285 598 PANTHER - 1 598 - -
Bva09g00285 598 Gene3D - 352 596 IPR027417 -
Bva09g00285 598 Pfam ABC transporter 90 244 IPR003439 GO:0005524
Bva09g00285 598 SMART AAA_5 408 575 IPR003593 -
Bva09g00285 598 SMART AAA_5 96 298 IPR003593 -
Bva09g00285 598 CDD ABCF_EF-3 383 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00285 Bva-Chr9 1489459 1493013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00285 203 270 Calmodulin-binding Proteins AT2G36910 41.429 1.13e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00285 K06185 - gmx:100785099 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00285 09 1489459 1493013 Bva07g02356 07 19224232 19228130 BWGD
Bva09g00285 09 1489459 1493013 Bva09g00285 09 1489459 1493013 ECH