Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00284 ATGGGCAACGTCAGAAGCAATAACAGCAAAAAGAAGGGTGGCATTGTGAAGCTCAAGGTTGTGGTTGAGATGCTTCAAAAGAGGCTCTTTATACAGGGTAATAGGAGATCAAATTCCTGCTATGATGAATGGGAAATTGAAGAAGCTTGTGAGTCGGGTTATGTGCCAGAGGATGTTAAAGAAGGGCACTTTGCAGTGATGGCTGAGGATGGGGAAGAACCCAAGAGATTCGTGGTGCCATTGAGTTGTTTAACACACCCAACATTTTTGAGGTTATTGGAACAATCAGCTGAAGAGTATGGGTTTGATCAAGAAGGAGCATTAAGCATTCCTTGCAGGCCAAGTGAGCTTGAGGAGATATTGGCAGAGCAATGGCACCAAGATGAAGATTCAGAACGTGTACCAATAAGCTGGGATTCCTGTAATTA 428 0.4369 MGNVRSNNSKKKGGIVKLKVVVEMLQKRLFIQGNRRSNSCYDEWEIEEACESGYVPEDVKEGHFAVMAEDGEEPKRFVVPLSCLTHPTFLRLLEQSAEEYGFDQEGALSIPCRPSELEEILAEQWHQDEDSERVPISWDSCN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00284 142 Pfam Auxin responsive protein 42 121 IPR003676 GO:0009733
Bva09g00284 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 131 IPR003676 GO:0009733
Bva09g00284 142 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 23 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00284 Bva-Chr9 1487804 1488232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00284 13 135 Calmodulin-binding Proteins AT5G20810 34.884 1.97e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00284 - K14488 vvi:100267173 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00284 09 1487804 1488232 Bva07g02357 07 19229908 19230342 BWGD
Bva09g00284 09 1487804 1488232 Bva09g00284 09 1487804 1488232 ECH