Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00281 ATGTCTAACCAAGCTGAATCATCGGACTCGAAATCGGGGAAGAAAGACTACTCGACTGCGATTCTGGAGCGCAAGAAGTCGCCCAACCGACTGGTTGTTGACGAGGCCGTCAACGATGACAACTCCGTGGTCTCTATGCACCCTGCCACCATGGAAAAGCTGCAGCTTTTCCGAGGAGATACAATCCTCATCAAGGGTAAGAAACGTAAGGATACAATTTGCATAGCTCTTGCTGACGACACATGTGAGGAACCCAAGATCAGGATGAACAAAGTTGTGAGATCAAATTTGAGGGTTCGGCTTGGAGATGTTGTATCTGTGCACCAGTGCCCTGATGTCAAGTATGGAAAACGTGTCCATATTCTACCCATCGATGATACCATTGAAGGTGTTACTGGCAATCTGTTTGACGCATATTTGAAACCTTATTTCTTGGAGGCATATCGTCCTGTCAGAAAAGGAGACCTATTTCTTGTACGTGGAGGGATGAGAAGTGTAGAGTTCAAGGTCATTGAAACTGATCCAGGGGAGTATTGTGTGGTTGCTCCAGACACGGAAATTTTTTGTGAGGGGGAGCCTGTGAAAAGGGAGGACGAGGAAAGGTTGGATGAAGTTGGTTACGATGATGTGGGTGGTGTTAGAAAGCAGATGGCACAGATTCGTGAATTGGTAGAACTTCCACTGAGGCATCCTCAACTTTTCAAATCAATTGGTGTGAAACCACCCAAAGGAATTTTACTATATGGACCCCCGGGTTCTGGGAAAACATTAATCGCAAGAGCTGTCGCTAATGAAACCGGAGCCTTCTTCTTTTGTATTAATGGGCCAGAGATCATGTCCAAACTGGCTGGAGAGAGTGAAAGCAATCTCAGGAAAGCATTTGAAGAAGCTGAAAAGAATGCACCATccatcatttttattgatgagCTCGATTCTATTGCACCCAAGCGGGAGAAGACTCATGGTGAAGTTGAAAGGAGAATTGTTTCACAGCTTTTGACTCTTATGGATGGATTGAAATCTCGGGCTCATGTTATTGTTATTGGAGCTACAAATCGTCCAAACAGCATTGACCCAGCACTGAGAAGGTTTGGGAGATTTGATAGGGAAATTGATATTGGTGTCCCCGATGAAGTTGGCAGACTCGAAGTCCTTCGCATTCATACCAAAAACATGAAGCTCTCTGATGATGTTGATTTAGAGAGAATTGCAAAGGATACCCATGGATATGTTGGTGCTGACCTTGCAGCACTTTGCACTGAAGCTGCTTTGCAGTGCATCAGGGAGAAGATGGACGTCATTGACTTGGAAGATGAGACCATTGATGCTGAAGTTCTGAATTCTATGGCAGTTACAAATGAGCATTTCCAGACTGCTCTAGGAACAAGCAACCCATCAGCTTTGCGTGAAACTGTTGTTGAGGTGCCTAATGTTAGTTGGGAGGATATTGGAGGCCTTGAGAATGTAAAGCGTGAACTGCAAGAGACTGTTCAATATCCAGTGGAGCACCCAGAAAAGTTTGAGAAATTTGGTATGTCTCCATCAAAAGGAGTCCTCTTCTATGGCCCTCCTGGATGTGGGAAAACCTTGTTGGCCAAGGCAATAGCTAATGAATGTCAAGCTAACTTCATCAGCATCAAGGGCCCTGAACTGCTTACAATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAAATATTTGACAAGGCCCGACAATCAGCTCCATGTGTCCTCTTCTTTGACGAGCTTGACTCGATTGCCACTCAGAGAGGAAGTAGTGTCGGGGATGCTGGTGGTGCTGCTGATAGAGTTCTGAATCAACTGCTGACTGAAATGGATGGCATGTCTGCAAAAAAGACAGTGTTCATTATTGGGGCAACCAACAGACCTGACATCATTGACCCAGCTCTTCTTCGGCCAGGCCGTCTTGATCAGCTGATCTATATTCCTCTCCCTGATGAAGATTCCCGTCATCAAATCTTCAAAGCCTGCTTGAGAAAGTCTCCTGTCTCGAAAGATGTTGATTTGAGAGCACTAGCGAAGTATACCCACGGCTTCAGTGGGGCTGATATTACAGAGATATGCCAGCGAGCATGTAAATATGCTATAAGGGAAAATATAGAAAAGGATATAGAGCGAGAGAGGAGAAGGAGGGAGAATCCTGAGGCCATGGATGAAGATGTTGACGAAGAAGTTGCAGAGATCAAAGCTGCCCATTTTGAAGAGTCAATGAAGTTTGCTCGTAGGAGTGTTAGTGATGCAGATATACGCAAATACCAGGCATTTGCTCAGACCTTGCAGCAGTCCAGGGGGTTTGGAAGTGAATTTAGGTTTCCAGAGGCTACTGGGGCTACTGGATCCGAGCCATTGGCAACTTCTGCCGGCGGGGATGATGATGATTTGTATAGTTA 2411 0.4517 MSNQAESSDSKSGKKDYSTAILERKKSPNRLVVDEAVNDDNSVVSMHPATMEKLQLFRGDTILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTHGFSGADITEICQRACKYAIRENIEKDIERERRRRENPEAMDEDVDEEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPEATGATGSEPLATSAGGDDDDLYS 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00281 803 SUPERFAMILY ADC-like 26 110 IPR009010 -
Bva09g00281 803 ProSitePatterns AAA-protein family signature. 621 639 IPR003960 GO:0005524|GO:0016887
Bva09g00281 803 Gene3D - 376 467 - -
Bva09g00281 803 TIGRFAM CDC48: AAA family ATPase, CDC48 subfamily 31 767 IPR005938 GO:0016787
Bva09g00281 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 764 IPR027417 -
Bva09g00281 803 Pfam Cell division protein 48 (CDC48), domain 2 132 195 IPR004201 -
Bva09g00281 803 MobiDBLite consensus disorder prediction 773 803 - -
Bva09g00281 803 SMART CDC48_N_2 30 113 IPR003338 -
Bva09g00281 803 MobiDBLite consensus disorder prediction 1 22 - -
Bva09g00281 803 Gene3D - 468 651 IPR027417 -
Bva09g00281 803 Gene3D - 210 374 IPR027417 -
Bva09g00281 803 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 5 781 - -
Bva09g00281 803 Pfam ATPase family associated with various cellular activities (AAA) 518 651 IPR003959 GO:0005524|GO:0016887
Bva09g00281 803 Pfam ATPase family associated with various cellular activities (AAA) 245 374 IPR003959 GO:0005524|GO:0016887
Bva09g00281 803 SMART AAA_5 241 377 IPR003593 -
Bva09g00281 803 SMART AAA_5 514 653 IPR003593 -
Bva09g00281 803 Gene3D - 655 763 - -
Bva09g00281 803 PANTHER AAA-FAMILY ATPASE 5 781 - -
Bva09g00281 803 Gene3D - 113 209 - -
Bva09g00281 803 CDD AAA 484 651 - -
Bva09g00281 803 SMART CDC48_2_2 130 196 IPR004201 -
Bva09g00281 803 SUPERFAMILY Cdc48 domain 2-like 112 204 IPR029067 -
Bva09g00281 803 CDD AAA 211 374 - -
Bva09g00281 803 Pfam AAA+ lid domain 397 439 IPR041569 -
Bva09g00281 803 Pfam AAA+ lid domain 673 713 IPR041569 -
Bva09g00281 803 Gene3D - 7 112 - -
Bva09g00281 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 466 IPR027417 -
Bva09g00281 803 Pfam Cell division protein 48 (CDC48), N-terminal domain 30 111 IPR003338 -
Bva09g00281 803 ProSitePatterns AAA-protein family signature. 345 363 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00281 Bva-Chr9 1469214 1473345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00281 447 777 Calmodulin-binding Proteins AT3G56690 42.900 3.53e-80 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00281 K13525 - pvy:116113584 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00281 09 1469214 1473345 Bva09g00281 09 1469214 1473345 ECH