Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00279 ATGGCTGAAATTGAGGGATCTCCAGGAAGCTCCATGCATGGAGTTACAGGCAGAGAACAAACCTTCATATCCTCAGTTTCTTCCCCAATGGTTCCAACTGACACCACTGCCAAGTTTGCTCTTCCTGTTGATTCTGAGCATAAGGCAAAAGTTTTCAAACTCTTCTCCCTTGCCAAGCCCCACATGAGAACCTTCCACCTATCTTGGATCTCCTTCTTCACTTGCTTTGTTTCCACTTTTGCAGCAGCTCCTCTTGTTCCCATCATTCGTGATAACCTCAACCTCACAAAATTTGACATTGGAAATGCGGGGGTTGCTTCCGTTTCAGGAAGCATCTTCTCTAGGCTTACAATGGGTGCAGTTTGTGACCTTTTAGGCCCTCGTTACGGCTGCGCCTTCCTTATCATGCTAACAGCTCCAACTGTGTTCTGTATGTCATTTGTGAAAGATGCAGCTGGTTACATAGTAATAAGGTTCATGATTGGGTTCTCATTGGCGACTTTTGTTTCATGCCAATACTGGATGAGCACTATGTTCAATAGCAAGATCATAGGGCTTGCTAATGGGACTGCTGCTGGGTGGGGTAACATGGGTGGGGGAGCCACTCAACTTATAATGCCCTTGGTGTATGAGTTGATAAGAAGAGCTGGGGCTACTCCCTTCACTGCATGGAGGATTGCCTTCTTCATCCCTGGTTGGATGCATATCATCATGGGGATCTTGGTCTTAACACTTGGCCAAGACTTGCCTGATGGAAACCTTGGTGCCTTGCAGAAGAAGGGTGACGTTGCTAAAGACAAGTTCTCCAAGGTGTTGTGGTATGCCATAACAAATTACAGGACATGGATTTTTGTTCTCCTCTATGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATCGCTGAGTATTTCTTTGATAGGTTTAATCTCAAGCTTCACACTGCTGGAATCATTGCTGCTTGCTTTGGAATGGCTAACCTGGTTGCTCGTCCCCTCGGAGGGTATGCTTCTGATTTTTCAGCTCGGTTGTTTGGCATGAGAGGCAGGCTCTGGACCCTTTGGATCTTCCAAACCTTAGGAGGGGCCTTTTGCATTTGGCTTGGCCGAGCCAATTCACTTCCTATTGCTGTATTGTCTATGATTCTCTTCTCTATTGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATTATCCCATTCATTTCAAGGAGGTCTCTGGGGATTATATCAGGTCTAACTGGTGCAGGTGGCAACTTCGGTTCTGGCCTGACccaattgattttcttttcaacctCAAAATACTCAACATCCACAGGTCTCTCCTTGATGGGAGTAATGATTGTATGCTGCACTCTTCCCGTGACTCTGGTTCACTTCCCACAGTGGGGTGGCATGTTCACCCCTCCTTCCAAAGATGTTCAGAGATCCACCGAAGAACATTATTATACTTCTGAGTGGAATGAAGAAGAGAGGCAGAAGGGCCTGCACCAGAACAGTCTCAAGTTTGCAGAGAACAGCCGCTCTGAGAGAGGCAAGCGTGTGGCATCTGCCCCAACCCCACCAAACGCAACTCCCAGCCATGTCTA 1592 0.4661 MAEIEGSPGSSMHGVTGREQTFISSVSSPMVPTDTTAKFALPVDSEHKAKVFKLFSLAKPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKFDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVKDAAGYIVIRFMIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWMHIIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFVLLYGYSMGVELTTDNVIAEYFFDRFNLKLHTAGIIAACFGMANLVARPLGGYASDFSARLFGMRGRLWTLWIFQTLGGAFCIWLGRANSLPIAVLSMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSKYSTSTGLSLMGVMIVCCTLPVTLVHFPQWGGMFTPPSKDVQRSTEEHYYTSEWNEEERQKGLHQNSLKFAENSRSERGKRVASAPTPPNATPSHV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00279 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Bva09g00279 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Bva09g00279 530 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Bva09g00279 530 MobiDBLite consensus disorder prediction 487 530 - -
Bva09g00279 530 Gene3D MFS general substrate transporter like domains 264 465 IPR036259 -
Bva09g00279 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
Bva09g00279 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Bva09g00279 530 SUPERFAMILY MFS general substrate transporter 56 460 IPR036259 -
Bva09g00279 530 MobiDBLite consensus disorder prediction 487 513 - -
Bva09g00279 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00279 Bva-Chr9 1462780 1464069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00279 1 530 Inorganic Solute Cotransporters AT1G08090 79.811 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00279 K02575 - gmx:100807710 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00279 09 1462780 1464069 Bva07g02363 07 19259405 19261858 BWGD
Bva09g00279 09 1462780 1464069 Bva09g00279 09 1462780 1464069 ECH