Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00274 ATGAGCTACGGAGATGGACAAAACAAGACGAGAAATGCTGGTTTggttataattattgtattaagCTGCTTTTCTGGGCAAGTTCTTTGTCAGGACAGCCCGAATGATACTACGATTCAGCTCTTCGCCGAGGCCATCTACAGCAGCCTCTCTAATTTTACCTCCATCTTCAAGGACGAAATCAAAGAACATTTGGGTTTTTGCATAGTTGATGTGGATGCGGATTGGGATGGGgcatttaatttctcaaaaaatttgaattttctgacCCAATGTGCCCAGAAAGCTAAAGGAGATATTACACAGCGCATATGCACAGCAGCAGAAGTAAAGTTCTATGCCGGTAGTTTTGCTACCTCGTCATCAAGAAGCTCGAGCAACTACTTGAAGCCCAACAAGAACTGTAACTTGAGCTCATGGGTTGATGGATGTGAACCTGGATGGGGCTGTAGTGCTGCTCAGAAAGTTGAACTTAACAATTCCCAAGACATACCAGTTAGAACTAGTGATTGCCAGCCTTGCTGTGAGGGTTTCTTTTGCCCTCACGGCATTACTTGCATGATACCTTGCCCATTGGGTGCTTACTGTCCACTGGCACAACTCGATAATGACACTGGAGTATGTGAACCATATCGTTATCAGCTACCTCCAGGAAAGCCGAATCATACTTGTGGGGGAGCAGATATTTGGGCGGACATTACGAGTAGTCGCGAGGTATTCTGTTCAGCAGGATCATACTGTCCGTCTACTGTCCAAAAAAATCCTTGCAGTAGGGGGTATTACTGCAGGACAGGTTCTACTACCAGAGAGAAATGTTTCAGGCTGGCGTCTTGTGAACCCCAATCAGCGAATCAGATTATTACTGCATATGGTGTCATCGTTTTTGCTGGCTTGAGTCTTTTgcttattatcatatataattgcTCTGATCAAGTACTTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAGAGAGCTGCTCAAAGTGTAAGAGAATCTCAAGCACGTGAAAAATGGAAATCTGCAAAAGATGTTGCTAAGAAGCATGCAGTAGAATTGCGTGCACAATTATCAAGAACATTTTCTCGTAGAAAGCAGCCAGATTTGAGAGGTGTTGGTTCTAAAAATGAATCTTCCCAAACGCTAATGGTTACAGGAGGCTCTGGTACTTCTCAGAAAtctaaaggaaagaaaaaggagaaaagcaaCCTCACTAAAATGATTGACCAAATTGAGGAAAACCCTGATTGTCCAGAAGGCTTTCATCTTGCGATTGGCgataaaaatatcaagaagCAAGCACCAAAGGGTAAGCAACTGCATACTCAGAGccaaatttttaagtatgCATACGGTCAGATTGAGAAGGAGAAGGCAATGCAGGAACAAAATAAGAACCTGACCTTCTCAGGAGTTATTTCAATGGCCAGTGATATTGAAATCAGGAAGAGGCCAATGATTGAGATTGCCTTTAAAGATTTAACCCTCactttgaaaggaaaaaacaaacatCTTTTAAGAAGTGTGACTGGGAAATTATTTCCTGGCCGAGTTTCAGCAGTTATGGGCCCATCCGGTGCTGGTAAAACAACATTTCTTTCTGCTTTAATGGGAAAAGCACATGGATATACCACAACTGGTTTGGTTCTTGTAAATGGGAAGGTTGAGTCTATTCGGTCATACAAGAAAATCATTGGATTTGTGCCACAAGATGATATTGTGCATGGAAATTTGACAGTGGAGGAGAACCTGTGGTTCAGTGCCAGATGCAGACTCTCAGCTCATCTGCCACAAGCAGAGAAGGTTCTAGTGGTTGAAAGAGTGATCGAGTGCTTGGGTCTGCAGCCAGTGAGGGATTCTCTGGTTGGGACAGTAGAGAAGCGAGGAATCTCTGGTGGTCAAAGGAAACGTGTAAACGTTGGACTAGAAATGGTTATGGAACCTTCGCTTCTGATTTTAGATGAACCCACATCTGGTTTGGACAGTTCATCTTCTCAGCTACTGCTTAGAGCACTTAGGCGTGAGGCTCTTGAAGGAGTAAATATATGCATGGTCCTTCACCAACCAAgTTACTCTTTGTTCAAGATGTTCGATGATTTTATACTACTTGCTAAAGGCGGTCTTACCGTTTATCATGGACCAGTGAAGAAAGTTGAAGAATACTTTTCTGGCATGGGAATTGTTGTCCCCGAGCGTGTTAACCCTCCAGATTATTACATAGACATATTAGAAGGAATAGTGATACTTAATACGAGCTCTGGAGTGAACTATAAACAACTACCAGTTAGATGGATGCTTCATAATGGTTACCCAGTTCCCATGGATATGCTAAAAACTGTTGAAGGAATGGAAGGCACATCTGGTGAAAGTTCATCACATGGAGGAGCTAATCCTGGAGGGGAAGGTGAAGATACCTCTTTTGCTGGAGAACTTTGGCAGGATGTAAAGACAAACGTTGATATAAAGAAAGAcatcttacaaaataatttcttgtcTTCTAGTGATTTATCCAATCGTAAAGCCCCAGGAGTGCTACTACAATACAGATACTTTCTTGGAAGGGTTGGTAAGCAACGGCTACGGGAAGCTGGAACTCAAGCTGTAGACCTTCTTATTTTGTTAGTAGCTGGAATATGCTTAGGAACACTTGCCAAAGTTAGCGATGAAacatttggagctagtggttATACATACACTGTGATAGCAGTATCGCTCCTGTGCAAGATTGCGGCCTTGAGATCATTTTCATTGGATAAGTTGCACTATTGGAGGGAGAGTGGCGCTGGCATGAGTAGTCTGGCTTACTTTCTTGCAAAGGATACGGTCGATCATTTCAGCACAATTATTAAGCCTCTAGTTTATCTTTCAATGTTCTATTTCTTCAACAATCCGAGATCAACCGTTGTAGATAACTACATTGTCTTGCTGTGTTTGGTGTACTGTGTCACTGGCATAGCTTACATATTCGCAATCTATCTTGAACCTGGTCCAGCTCAACTGTGGTCAGTGTTGCTTCCTGTCGTTTTAACCCTCATGGCAACCCATTCCAACGACGAGAACAACAAATATGTGAAATATATAGCCGACTATTCCTACCCCAAGTGGGCTCTGGAAGcatttataatatcaaatgCAAAGAGATACGCTGGAGTTTGGCTAATAACACGGTGCGGTTCACTCTATGCCCGCCAATATGATCTCAACCATTGGTTCCAATGTTTAGTATGCCTGGTCCTAACGGGAGTTCTTGGTCGCATTGTTGCATTCTTCTGTTTGATAGTCTTCCAGAAGAAATA 3299 0.4053 MSYGDGQNKTRNAGLVIIIVLSCFSGQVLCQDSPNDTTIQLFAEAIYSSLSNFTSIFKDEIKEHLGFCIVDVDADWDGAFNFSKNLNFLTQCAQKAKGDITQRICTAAEVKFYAGSFATSSSRSSSNYLKPNKNCNLSSWVDGCEPGWGCSAAQKVELNNSQDIPVRTSDCQPCCEGFFCPHGITCMIPCPLGAYCPLAQLDNDTGVCEPYRYQLPPGKPNHTCGGADIWADITSSREVFCSAGSYCPSTVQKNPCSRGYYCRTGSTTREKCFRLASCEPQSANQIITAYGVIVFAGLSLLLIIIYNCSDQVLATRERRQAKSRERAAQSVRESQAREKWKSAKDVAKKHAVELRAQLSRTFSRRKQPDLRGVGSKNESSQTLMVTGGSGTSQKSKGKKKEKSNLTKMIDQIEENPDCPEGFHLAIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKAMQEQNKNLTFSGVISMASDIEIRKRPMIEIAFKDLTLTLKGKNKHLLRSVTGKLFPGRVSAVMGPSGAGKTTFLSALMGKAHGYTTTGLVLVNGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSAHLPQAEKVLVVERVIECLGLQPVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYSLFKMFDDFILLAKGGLTVYHGPVKKVEEYFSGMGIVVPERVNPPDYYIDILEGIVILNTSSGVNYKQLPVRWMLHNGYPVPMDMLKTVEGMEGTSGESSSHGGANPGGEGEDTSFAGELWQDVKTNVDIKKDILQNNFLSSSDLSNRKAPGVLLQYRYFLGRVGKQRLREAGTQAVDLLILLVAGICLGTLAKVSDETFGASGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESGAGMSSLAYFLAKDTVDHFSTIIKPLVYLSMFYFFNNPRSTVVDNYIVLLCLVYCVTGIAYIFAIYLEPGPAQLWSVLLPVVLTLMATHSNDENNKYVKYIADYSYPKWALEAFIISNAKRYAGVWLITRCGSLYARQYDLNHWFQCLVCLVLTGVLGRIVAFFCLIVFQKK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00274 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 731 IPR003439 GO:0005524
Bva09g00274 1099 Coils Coil 395 415 - -
Bva09g00274 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 713 IPR027417 -
Bva09g00274 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 33 1095 - -
Bva09g00274 1099 MobiDBLite consensus disorder prediction 373 393 - -
Bva09g00274 1099 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524
Bva09g00274 1099 SMART AAA_5 516 717 IPR003593 -
Bva09g00274 1099 Pfam ABC-2 type transporter 688 1099 IPR043926 GO:0140359
Bva09g00274 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 1095 - -
Bva09g00274 1099 CDD ABCG_EPDR 487 714 - -
Bva09g00274 1099 MobiDBLite consensus disorder prediction 357 372 - -
Bva09g00274 1099 MobiDBLite consensus disorder prediction 357 403 - -
Bva09g00274 1099 MobiDBLite consensus disorder prediction 322 344 - -
Bva09g00274 1099 MobiDBLite consensus disorder prediction 784 804 - -
Bva09g00274 1099 Pfam ABC transporter 507 659 IPR003439 GO:0005524
Bva09g00274 1099 Gene3D - 488 726 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00274 Bva-Chr9 1426632 1432502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00274 517 720 Calmodulin-binding Proteins AT2G36910 29.148 1.53e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00274 - - gmx:100794093 1676.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00274 09 1426632 1432502 Bva09g00274 09 1426632 1432502 ECH
Bva03g01151 03 11125339 11135057 Bva09g00274 09 1426632 1432502 ECH
Bva04g02561 04 22969150 22976123 Bva09g00274 09 1426632 1432502 ECH
Bva13g01971 13 15863776 15870640 Bva09g00274 09 1426632 1432502 ECH