Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00271 aTGTGCAAAACCAAAATGGCGATCAACGCCACCAATCCCAGCCCCACACCCCGAGCCTCTAGAACTGCACGGTCTCAACCCACCCGACAAACCTCAATCCCAACACCAACAGCATCCAAACCCAAACCAGCCTTGGCTACCACCACTTCCTCCGACCCCTCAACCTCATACACCAGCAGCGCCGCCTATTCGGGCTCCACAGGTTACAGACTCTCTTCGGATACATCTATCTCTAGCCGAACCTCCCTTACCACGCTTCGAGAAAGCCTACCAGAAAACCCTCACATCTACCATTTCTCAGAAATTTGCTCTGCCACTAACAACTTCCTCGCCAAGCGCTactcctcctcctccaccaCCCCTTCTTGGCACTGCACTCTACGCGGCAGGGATGTCATTGTCTTTCAACGCAAATTCCGACGAAAAATCGAGACTGCCCAACTCAAAGACCGCCTCTCCCTCATTTGCCGAAGCCACCACATCAGCGTAATTAAGCTCCTCGGTGCTTCAATCTCCGGCGAACACATCTACCTCGTTTATGAGTTTGTGAATGGAGCCAACCTCTCTGATTGTTTGCGAAACTCAAAAAACCCCAACTTTACCGTTTTATCCACTTGGACATCGAGAATGCAGGTAGCTACAGATCTAGCACACGGGCTCGATTATATTCACAATAAAACAGGTTTAAACATAAGCTTCGTGCATAATCACATTAAGAGCACTGGTGTCGTTGTGACAGAACCTTCCTACAACGCCAAGATTTGTCATTTTGGTACAACCCTGATGTGTGGTGAAATCGACGAACAAAATGAAACCACAAAACAATTCGGAGAAATTACCGAGGAATCGTCCTCTTCTCCGTCGCCTAAACCATCGGGAAGCTTGAAAATGCAATTCCAGGGAGTCAGAGGTTACATGTCGCCAGAATTTCTGTCCAACGGCGTGGCGACCCAGAAATCCGATGTGTACGCTTTCGGAGTAGTGATTTTGGAGCTTTTATCGGGGGAGGAGCCATTGAAATACAAGTTTGACAAGAAAACAGGGAATTTCATTAGAACGTCGGTGATCGATACGGCGAGGGCCGTGATAGAAGGTAACTCTGGTGGCAGTGACGGCGACGGCGGAAGTAGACTTGACATAGAAGGAAGGCTAAGGAGCTGGGTGGATAGGAGGCTGAAGGACTCTTTCCCGGTGGAGGTCGCAGAGAAGATGACACGTGTAGCGTTAGATTGCGTACACGTAGATCCAGATAAGAGGCCAAACATGGGCCGGGTCGATTGGAAGatatctcaattatttttaaagtcaaGGATTTGGGCAGACAATATGAGGATACCTACTGATATATCTGTCTCATTGGCTGCTCGGTG 1370 0.4781 MCKTKMAINATNPSPTPRASRTARSQPTRQTSIPTPTASKPKPALATTTSSDPSTSYTSSAAYSGSTGYRLSSDTSISSRTSLTTLRESLPENPHIYHFSEICSATNNFLAKRYSSSSTTPSWHCTLRGRDVIVFQRKFRRKIETAQLKDRLSLICRSHHISVIKLLGASISGEHIYLVYEFVNGANLSDCLRNSKNPNFTVLSTWTSRMQVATDLAHGLDYIHNKTGLNISFVHNHIKSTGVVVTEPSYNAKICHFGTTLMCGEIDEQNETTKQFGEITEESSSSPSPKPSGSLKMQFQGVRGYMSPEFLSNGVATQKSDVYAFGVVILELLSGEEPLKYKFDKKTGNFIRTSVIDTARAVIEGNSGGSDGDGGSRLDIEGRLRSWVDRRLKDSFPVEVAEKMTRVALDCVHVDPDKRPNMGRVDWKISQLFLKSRIWADNMRIPTDISVSLAAR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00271 456 MobiDBLite consensus disorder prediction 276 295 - -
Bva09g00271 456 Gene3D Transferase(Phosphotransferase) domain 1 184 441 - -
Bva09g00271 456 PANTHER OS09G0572100 PROTEIN 1 455 - -
Bva09g00271 456 MobiDBLite consensus disorder prediction 1 74 - -
Bva09g00271 456 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 455 - -
Bva09g00271 456 Pfam Protein kinase domain 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00271 456 Gene3D Phosphorylase Kinase; domain 1 70 182 - -
Bva09g00271 456 ProSiteProfiles Protein kinase domain profile. 99 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00271 456 SUPERFAMILY Protein kinase-like (PK-like) 126 425 IPR011009 -
Bva09g00271 456 MobiDBLite consensus disorder prediction 275 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00271 Bva-Chr9 1413037 1414910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00271 92 439 Receptor kinase-like Gene Family AT1G51940 29.513 5.62e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva09g00271 Pkinase 4.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00271 - - adu:107461746 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00271 09 1413037 1414910 Bva09g00271 09 1413037 1414910 ECH
Bva03g01126 03 10647282 10648950 Bva09g00271 09 1413037 1414910 ECH
Bva09g00271 09 1413037 1414910 Bva07g02372 07 19308872 19311116 ECH