Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00270 ATGAGTAGCCTAAGGCCTGAATCGCATGTAGCACAGCAAATCCGGCGCGATAAGTTGAGAATCCAGCAATTGCAAGATTTTTCCAACAATCTGGAACAATCATCCTTACACCCAGGCATAACCTCTGATCTTGTCCAAGTTAGAAATGTTAGAAATGCCAATATGCTTTATGAACCAGCTTTCTACTCATCAGAAATGGCCAATTTTTCTTCCACTTTGAATCCTTTATCTGCTAATAGGGACGCAATGGCATGTCAGGAACTGGGTGCAGCTGAAGCGAGTAGGCTAATGATGCCTCAGTTTTCTGAATCGTTTCCCCATTCATCAGACCTAGCATCGTCCAGCGTTCATGCTTCCTCCAAAGAAGAATGTGCACCGCGTCACTTTGGCAATTGGAGAAACACTGGCTTAAGTCAAGGCTATGATTGGATGGTAAATTATGCAACTAGTTCTGTGTCAAATGAAACCATTCCTAATTCTCTCGTTGTTGCTGAACTCAATAATGTGTCTGCATATCAGCAATACGCGAAGCCTAGCTACAATGAACTCAACGATGTACAGTGTTCTCTGAGTAACATTTCAGTGGCCAATCGAGAAAGCCAAAGGCAATTAGGGGGAACGCATAGTCCTTgttctcctcctcctcctcctccactCTACCACAACAGTTTACAGGATATTGTCAAGTCAGCTTCTATCAGTGCCGAAGGCTCAGAAATGGCTTCAGTAATGCAGCAAACCGGCCATGGAATTTGGGTTGGAAATGGTAACGAGCTTGTTCTTCTTCCAAGCTATGGAAATCAATCAAATCAGTTTCGTTTTGGAAATGCTAATTCGTTGTGGACTATTCGAACAAGCGATGATTCCCTTACTTGGCATAGTCCATTGGGTTTTACAGCGAAAAGGAGCGAACAAGACTCAGGACCTGTCTTGAGTGATTCCAATCCTCAGGGCTTGTCTTTATCACTATCATCAAATGCACAATCCAAGCTCTCAGTTTCTCAGTTTGGAGAAGGGTCTGGCTCAGATGACCTTCAATCACGTTGTGGCATTTCTAAGGattctcaatattttaaatcagaGAAATCTATGTTCAAGCCTCCTATCATTTCTAAAGATTCTGGTAAGTCAATTCAAGACATAGTGGGGATACCTTCAAATCATGGTTACCGAAATGTGGGCCCTCTTGGCCCATTCACCGGATACGCAACTATTTTAAAGAGTTCGAGATTCATAAGGCCAGCCCAGCAATTGTTAGATGAGTTCTGCTGTTTTTCTGGTCCTAACATAATCAAGGTGTCTGACGTTTCTGAGGGGATCTCTGGAGAAGTTAGTGCTTCTACTTCCGCTGAAGCCTTTATTGCACCTGAAAGTGGGATTGGTGCAAATATTAGTACTTCAGGTGCTTCGTCATCTAAGTTTTATAGTTCAAACGAAGGCGGTGATGGTGGAACTGGAAGTAGCTTCTGTATGTCTTCTTGGCCAGACTATCATCAAAAAAAGGCAAAGCTCCTGTACATGCAAGAAGAGGTTACTAGAAGGTACAAGCAATACCATCAGCAAATGCAAATGGTTGTTTCATCCTTTGAGTCAGTTGCGGGGCTTAGTTCTGCTACTCCTTACATCTCCATGGCTCTAAAGTCAGTGTCAAGACAGTTCAGGTGCCTTAAAAATGCTATCACAGATCAGCTTAAGCATATAAGAGAAATGTTAGAAATGTTAGGAGAGGACTTGTCGGCACCCAGTTCTGGTACAGGTAGTAAGCTTGACAATAATGCGGCAAGGCTAAGGTACATGGACCAAAGCTTACAAAAGAACAAATCCAGTGGGGGTAACATGGCCTTTCTTGAACCACAGCAGCATGTCTGGAGACCCCAGAGAGGCTTACCAGAACGTTCTGTGGCAATTCTTAGAGCTTGGTTGTTTGAACATTTTCTTCATCCGTACCCCACGGACACTGATAAACACATGTTGGCTACTCAAACAGGTCTATCAAGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTTCGTGTGTGGAAGCCAATGGTTGAGGAAATACACACGCTTGAGACGAAAGGCTTGACGGGTACTAATCACAACTTGAGTAAGGGAACTTCTGCCACTAAAGGTCCTAGCCAGCCTAGGGTTGATCAATCTTTAAACAAGTTTGGGGCACATACAATCCCTGAAAAGCAGTTGGATTGCTTGGAAATGGGATCATATGCGGGTGCTAGGCACGAAGAGGGGCTAAATGCAGAACAGTGGAATCAAGAGAAGCGATCTAAACTGGAATGTGAGATTACATCTAACATGGATGGGACGTTGATGGGTTTTATGCCATACAGAAGGGGTGGCATTGAGGTTGGTGGTCTTGGATCAGTGTCACTAACATTGGGTCTGAGACACGGCGTTGATGGTGCACAGCAACAGCAGCACAAGCTACAACAAGAGGATCAGCTTAGACATCACTTTGGAGGGCAGATGATTCATGACTTTGTGGGCTG 2510 0.4319 MSSLRPESHVAQQIRRDKLRIQQLQDFSNNLEQSSLHPGITSDLVQVRNVRNANMLYEPAFYSSEMANFSSTLNPLSANRDAMACQELGAAEASRLMMPQFSESFPHSSDLASSSVHASSKEECAPRHFGNWRNTGLSQGYDWMVNYATSSVSNETIPNSLVVAELNNVSAYQQYAKPSYNELNDVQCSLSNISVANRESQRQLGGTHSPCSPPPPPPLYHNSLQDIVKSASISAEGSEMASVMQQTGHGIWVGNGNELVLLPSYGNQSNQFRFGNANSLWTIRTSDDSLTWHSPLGFTAKRSEQDSGPVLSDSNPQGLSLSLSSNAQSKLSVSQFGEGSGSDDLQSRCGISKDSQYFKSEKSMFKPPIISKDSGKSIQDIVGIPSNHGYRNVGPLGPFTGYATILKSSRFIRPAQQLLDEFCCFSGPNIIKVSDVSEGISGEVSASTSAEAFIAPESGIGANISTSGASSSKFYSSNEGGDGGTGSSFCMSSWPDYHQKKAKLLYMQEEVTRRYKQYHQQMQMVVSSFESVAGLSSATPYISMALKSVSRQFRCLKNAITDQLKHIREMLEMLGEDLSAPSSGTGSKLDNNAARLRYMDQSLQKNKSSGGNMAFLEPQQHVWRPQRGLPERSVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHTLETKGLTGTNHNLSKGTSATKGPSQPRVDQSLNKFGAHTIPEKQLDCLEMGSYAGARHEEGLNAEQWNQEKRSKLECEITSNMDGTLMGFMPYRRGGIEVGGLGSVSLTLGLRHGVDGAQQQQHKLQQEDQLRHHFGGQMIHDFVG 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00270 836 MobiDBLite consensus disorder prediction 696 721 - -
Bva09g00270 836 CDD homeodomain 623 684 IPR001356 GO:0003677
Bva09g00270 836 Gene3D - 626 688 - -
Bva09g00270 836 ProSiteProfiles 'Homeobox' domain profile. 620 683 IPR001356 GO:0003677
Bva09g00270 836 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 26 806 - -
Bva09g00270 836 SMART prehox3 400 562 IPR006563 -
Bva09g00270 836 SMART HOX_1 623 687 IPR001356 GO:0003677
Bva09g00270 836 Pfam Associated with HOX 405 561 IPR006563 -
Bva09g00270 836 Pfam Homeobox KN domain 640 679 IPR008422 GO:0003677|GO:0006355
Bva09g00270 836 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 26 806 - -
Bva09g00270 836 MobiDBLite consensus disorder prediction 199 219 - -
Bva09g00270 836 SUPERFAMILY Homeodomain-like 625 689 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00270 Bva-Chr9 1399261 1406207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00270 391 693 Homeobox Transcription Factor Family AT5G02030 44.805 3.02e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva09g00270 POX 4.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00270 - - jre:109019501 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00270 09 1399261 1406207 Bva07g02374 07 19317391 19323597 BWGD
Bva09g00270 09 1399261 1406207 Bva09g00270 09 1399261 1406207 ECH