Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00267 ATGTGCATAAGTTCAAGCTCTGCTCAGCATTATTACGACTCTTCAAATTGTTCTACTTCAAACAACAGCAACCGAGGATCAGGATACACTTGTAATTTGTCCAATGATTCATGCAGCACATTCTTGGTTTACAGAGCCAACCAGAATTTCCAAACCATTTCAGATATCTCGAAGCTCTTCAGCAAGAATAACTCTGAGGAGCTACTTCACATAAACAATCTCGCATCTTCTTCCCAGTTACTCAAACCAGGTAAAGAGGTTCTTCTTCCAGTGACCTGCTCCTGCTCTGTAGACCAGTTTTATCAAGTCAATTTGACTTATAAAACCCCTGAGAGGACAACATTTTCAGAGGTTGCTTGTGGGGTATTTGAAGGGCTGCTAAAAAATCATACTCTTGTTGAGGAAAATCTTCCTCTTGTAAACAACCTCGAAGCTGGCTCCGTACTTCATGTGCCTCTGAGATGCGCATGTCTTGACAATTTCACCAGTGGCAAGGGGGTGAAGTACCTTGTAACATACCCTATAATGAAAGGAGATGAACCAGCCAAATTGTGTCAGAAATTCCGCATCTCATCTGAAGATTTCTGGGCAGTAAATACCTTAACTCATTGGGATTCTCTTTTCCCAGATACAACTGTGTTAATTCCACTAACAGATACCACAATCAGAATTTATGATGTTCCAGATTCTCCACCACCAGCATCAGAATTTCCTTCCACAATTCCAGGGGAAAGGAAACAAGAAGCTACAAAGCCTGTTCAATTGTATATTGTAGGCTCTATTATTGGTTTGTTGTTGTTACTCACATTAATGCTTGCATGTGGAATTTACATGAAGGGCTTAAGGAGATGGAAAAGGGAAAATCTGATGGCTTTCACAGTTACAAACTCCCCCAACTCAAGCTCACCAACGAGAAGCTCACCTAGATCTACCCAAACGGGTAGAACCTCTTCAACTTCATGCCTGTCTCCTGACCTTCTTGTTGGAATAAAGTACTGTTTGTTCAATTACAGCTTAGAAGAGCTCAAAAGGGCAACTAAGGATTTCAGTGAAGAAAACAAGATTGGTGGGTCAACCTATAAGGGCTTAGTGAATGATATTGAGGTAATGATCAAGAAGGTGAGGTTTGAAGACACGCGCCCGGTAATTGATTTACATTCTAAAATCAATCACATTAACATTGTGAGCTTACAAGGTGTTTGTTATGGTGAGGGTGATTTTTCCTGGTCTTATTTAGTTTTTGAGTTGCCTGAAAATGGCAACTTGAGGGACTGTTTATCTGATCTATGCAATCCCCTTCACTGGCAAAGGAGGACACAGATAGCTTTTGATATTGCAACAGGTCTTCACTATTTACATTGCTGTGCTTCTCCTTCCTACACTCACATGAATATTAGTAGTAGAATTATATTCATAACAGGAAACTGGAGAGCAAAATTGGCAGATATTGGAATGGCTTCTGCTGAAATTGAAAAACCTGTCAAAGGAAATGATAGAACAGAAAATCACAAAGGATGGGTTGCACCAGAGTACCTTCTCCATGGCTCAGTTTGTGAGAAGGTTGATATTTTTGCATTTGGAGTTGTCTTGCTTGAGCTGATCTCAGCTAGAGACAACATTGGTGAAAAATCATTCAAAGATTCCATCGGTTTTTTGGGATCAGCCAATGAAAGGGGTTGCTTTGAAGGATTGAGGGGTCTCATGGATCCTAATCTGAATGATTATCCTCTTGCTGAAGCTTTATGTTTGGCTGTTTTAGCAAAGGCTTGTTTGGCAGATGATCCCCAGCATAGACCAACTATGGATGATATCATGAAAGTTCTTGGAAGAGTGGCTTA 1838 0.4048 MCISSSSAQHYYDSSNCSTSNNSNRGSGYTCNLSNDSCSTFLVYRANQNFQTISDISKLFSKNNSEELLHINNLASSSQLLKPGKEVLLPVTCSCSVDQFYQVNLTYKTPERTTFSEVACGVFEGLLKNHTLVEENLPLVNNLEAGSVLHVPLRCACLDNFTSGKGVKYLVTYPIMKGDEPAKLCQKFRISSEDFWAVNTLTHWDSLFPDTTVLIPLTDTTIRIYDVPDSPPPASEFPSTIPGERKQEATKPVQLYIVGSIIGLLLLLTLMLACGIYMKGLRRWKRENLMAFTVTNSPNSSSPTRSSPRSTQTGRTSSTSCLSPDLLVGIKYCLFNYSLEELKRATKDFSEENKIGGSTYKGLVNDIEVMIKKVRFEDTRPVIDLHSKINHINIVSLQGVCYGEGDFSWSYLVFELPENGNLRDCLSDLCNPLHWQRRTQIAFDIATGLHYLHCCASPSYTHMNISSRIIFITGNWRAKLADIGMASAEIEKPVKGNDRTENHKGWVAPEYLLHGSVCEKVDIFAFGVVLLELISARDNIGEKSFKDSIGFLGSANERGCFEGLRGLMDPNLNDYPLAEALCLAVLAKACLADDPQHRPTMDDIMKVLGRVA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00267 612 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 1 611 - -
Bva09g00267 612 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 611 - -
Bva09g00267 612 MobiDBLite consensus disorder prediction 1 23 - -
Bva09g00267 612 ProSiteProfiles LysM domain profile. 171 215 IPR018392 -
Bva09g00267 612 ProSiteProfiles Protein kinase domain profile. 266 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00267 612 Pfam LysM domain 52 90 IPR018392 -
Bva09g00267 612 Pfam LysM domain 177 216 IPR018392 -
Bva09g00267 612 Gene3D Phosphorylase Kinase; domain 1 315 415 - -
Bva09g00267 612 Gene3D Transferase(Phosphotransferase) domain 1 418 612 - -
Bva09g00267 612 SUPERFAMILY Protein kinase-like (PK-like) 331 608 IPR011009 -
Bva09g00267 612 MobiDBLite consensus disorder prediction 295 320 - -
Bva09g00267 612 Pfam Protein tyrosine and serine/threonine kinase 383 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00267 Bva-Chr9 1391444 1393282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00267 4 611 Receptor kinase-like Gene Family AT2G23770 32.103 9.18e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva09g00267 PK_Tyr_Ser-Thr 3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00267 - - hbr:110641177 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00267 09 1391444 1393282 Bva09g00267 09 1391444 1393282 ECH