Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00264 ATGAAGCTGCAAGGCAAAGCAACTCTTGCATTTGTTATAAGCTTAATCTGCATTCAACACACATTCTGTGATGAACCTTCTGATTCTTCTGGTGTAAACAAATGGAATTGTAAATGTTCTTCTTTCCAAGAGAACCGGAACTTTTCTCTTGCTAATTGTTCCAGGTCATGTGATTGCCATTCAGATGGCGGAGAAAGTGCAACTATGTGGACATGCACATGCGATCCCAATGGGTTCCCTACGGTGGCTGCAGATGGCCATAGTCCTAATTGCTTTACAGCATGCAACTGCACCTGGGGAACTCTCAGCACGTCACCTGGTTCAAAGAAGCACCTTTCGAGCAagattgttgttgttattctATTAACAAGTTTTATATGCACGTCCATTGCATTTATTGTGTCAGTGATATGCTACTTTTGCCGAAGGGATACGTGTCCTATTCAAACACCGGTATTCTCATCAGATAAGGAAACAAGTTACAATAGTACCACCAACTTAATTAGTAATAGGACTTCATTGCCAGAAATCAAAGTTATTGTAAATTCTCCTATCAATCATATTACGGGATGCTTTCACAAGGCCTCTTTCTTGTCTGGGAGCAAAACAGAAACTTTACATATAAACATCATTCGATTTTCGTTTGCTGAACTGGAAAATGCCAcggaaattttttcttcttccaacCTTATTGGACTTGGTGGAAGTAGTTATGTTTATCGTGGTAAGCTGAAAGATGGTAGTAATGTGGCCGTTAAGCGACTAAAATCTCAAGGAGGGCCTGAAGCTGACTCTGAATTTTTGACAGAGATTGAACTGTTATCTAGACTTCATCATTGTCATTTGGTGCCTTTACTTGGATACTGCTTAGAATTAAAAGGGAAACAAGTTGAGAGGCTACTAGTATTTCGGCACATGACCAATGGCAATTTGAGGGATTGTTTGGACGGAAGATCTGGAAAGAATTTGGATTGGGCTACTCGTGTTACAATTGCAATAGGAGCTGCAAGAGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAAAATTCTGCATAGAGATGTCACATCAACAAACATTCTTCTCGATGAAAATTGGCAAGCAAAAATAACAGATCTTGGTATGGCTAAAAACTTGAGAGCTGATGACCTTCCCAGCTGCTCAAATTCTCCAGCAAGAATGCAGGGGACATTTGGCTATTTTGCACCTGAGTATGCAGTTATTGGAAGAGCCTCTCTTAAATCAGATGTATTCAGTTTTGGGGTGGTTCTTCTTGAGCTTGTTAGTGGTCGGCGTCCCATTTATAAATCCACTGGCAAAGAAGAAAGTCTTGTCATATGGGCTACTCCTCGCTTACAGGATAGCAGGCGAATAGTCACAGAGTTGGCCGATCCACAACTGGAAGGCAAGTTCCCAGAAGAAGAGATGCAGATAATGGCATACTTAGCAAAGGAATGTTTACTGTTGGATCCTGATAATCGGCCAACTATGAGTGAGGTTGTTCAAATTCTTTCAACTATATCACCAGACAAGTCTAGGAGGAGAAGAAATCTTCCGATGAGCCCAATGAGCCTTCTTCAGGAACCTCAGGATGCAGACAAGCAAAGGAAAGATCCATCTAGTAAATATTCAGCTCGTTATTCGTTGCCATTAAATATTGATCGCAATCTTTGTGCTGGGAACAAAACTCAGAAAACAGATACAGTTTCAGCTGAGTCTATGGAGATCCTCTTGACTTCTAAATCACTGGATGATGATGAAGCTGAAGTGGTAGACTTAACTGAGCCTCGGTTTGAATCATTTTGCATGACAAACATCAGCTCCACTTG 1829 0.404 MKLQGKATLAFVISLICIQHTFCDEPSDSSGVNKWNCKCSSFQENRNFSLANCSRSCDCHSDGGESATMWTCTCDPNGFPTVAADGHSPNCFTACNCTWGTLSTSPGSKKHLSSKIVVVILLTSFICTSIAFIVSVICYFCRRDTCPIQTPVFSSDKETSYNSTTNLISNRTSLPEIKVIVNSPINHITGCFHKASFLSGSKTETLHINIIRFSFAELENATEIFSSSNLIGLGGSSYVYRGKLKDGSNVAVKRLKSQGGPEADSEFLTEIELLSRLHHCHLVPLLGYCLELKGKQVERLLVFRHMTNGNLRDCLDGRSGKNLDWATRVTIAIGAARGLEYLHEAAAPKILHRDVTSTNILLDENWQAKITDLGMAKNLRADDLPSCSNSPARMQGTFGYFAPEYAVIGRASLKSDVFSFGVVLLELVSGRRPIYKSTGKEESLVIWATPRLQDSRRIVTELADPQLEGKFPEEEMQIMAYLAKECLLLDPDNRPTMSEVVQILSTISPDKSRRRRNLPMSPMSLLQEPQDADKQRKDPSSKYSARYSLPLNIDRNLCAGNKTQKTDTVSAESMEILLTSKSLDDDEAEVVDLTEPRFESFCMTNISST 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00264 609 Pfam Protein tyrosine and serine/threonine kinase 229 504 IPR001245 GO:0004672|GO:0006468
Bva09g00264 609 ProSiteProfiles Protein kinase domain profile. 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00264 609 Gene3D Transferase(Phosphotransferase) domain 1 306 521 - -
Bva09g00264 609 CDD STKc_IRAK 231 504 - -
Bva09g00264 609 PANTHER OS01G0253100 PROTEIN 2 603 IPR045271 GO:0004714|GO:0006468
Bva09g00264 609 SUPERFAMILY Protein kinase-like (PK-like) 202 504 IPR011009 -
Bva09g00264 609 MobiDBLite consensus disorder prediction 511 544 - -
Bva09g00264 609 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 603 - -
Bva09g00264 609 Gene3D Phosphorylase Kinase; domain 1 196 305 - -
Bva09g00264 609 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Bva09g00264 609 ProSitePatterns Tyrosine protein kinases specific active-site signature. 350 362 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00264 Bva-Chr9 1356333 1361589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00264 1 606 Receptor kinase-like Gene Family AT2G28250 52.295 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Bva09g00264 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00264 - - gmx:100817870 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00264 09 1356333 1361589 Bva07g02383 07 19365639 19372067 BWGD
Bva09g00264 09 1356333 1361589 Bva09g00264 09 1356333 1361589 ECH