Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00262 ATGGGTTTTGGTAATTCAAGATCTGTAAGATTTCAAGATGATCTTGAAGTAGCAAAAGTCCCTGCAACTAACGGTGAAAATGGGATGAAGCTCAAATACAACATTGATGGAACACAAATACCTGAGTCTAGCTCCAATAAGAATCAGAAGAAGGCAACAGGGAAGACTGGAAAGTTCTTGAAAGCTAAAGTATTGACAAGAGTATTCTCAGAGGACTATGAGAGAGTCAAAAGAAGAATACTAGATCCTCGGGGACAAACAATTCACCGCTGGAACAAGATTTTCTTGGTAGCATGTTTAGTATCCTTGTTTGTGGACCCtctattcttttatttgcCGGTAGTTCGAGATGAAGCATGCATCAATATTGGAATAACGCTTGAAGCTATCCTCACAATCATCAGAACAGTGGCGGATATATTTTACATGATTCAGATTTTCATGAGGTTTCGCACATCCTATGTTGCTCCCTCTTCCCGGGTATTTGGGAGAGGAGAGCTTGTTATAGATTCTTCAAAGATAGCATTAAAGTACTTATGTAAAGGTTTCTTGTTAGACTTCATCGCTGCCCTGCCCCTTCCTCAGGCGTTAATTTGGTTTGTCATCCCCAAACTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTACGGTTTACCATCATTTTTCAGTATCTCCCGAGactctttctaatttttccactttcaTCACAAATAATAAAGGCTACAGGGGTTGTGACGGAAACAGCCTGGGCAGGGGCTGCTTACAACCTGATGCTTTACATGTTGGCAAGCCACTTTTTAGGAGCTTGCTGGTACCTTCTATCAATTGAGCGACAGGAAGCATGCTGGAGAAGTGTCTGCAATATGGAGAAGTCATCTTGTGAATATGGATTCTTCGACTGCCACAGTGTTCAAGATTCTCGCAGAGCCTCCTGGTTCATAACAAGTAATGTCACAAATTTGTGCTCACCAGATATTGACTTTTATCAGTTCGGTATGTACGGTGATGCAGTGACATCTGAAGTTACAAGCTCCgctttctttaataaatatttctactGTCTATGGTGGGGCCTAAGGAACCTGAGTTCTTTGGGACAAGGTCTACTTACTAGCACTTTTGTTGGAGAAATAGTGTTCGCCATCATTGTTGCAACCCTTGGACTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGACATACCTGCAGTCGACAACTGTCCGGTTAGAAGAATGGAGGGTTAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCCCAAGAACTAAGACAATCTGTGCGGAAATATGATCAGTATAAATGGCTGGCTACACGAGGAGTAGATGAAGAGACTCTTCTAAAAGGGCTTCCATTGGATCTTCAGAGAGACATCAAGCGCCACCTTTGCCTTGACCTGGTCCGAGGAGTTCCCTTGTTTGATCAAATGGATGAGAGAATGCTAGACGCAATATGTGAAAGGCTGAAGCCTGCATTGTGCACTGAGGGTACCTATCTAGTTCGTGAGGGTGATCCAGTAAATGAGATGCTTTTCATAATCCGAGGCCATCTTGATTCTTACACTACCAATGGAGGCCGCACTGGATTCTTTAATTCATGCCGCATTGGACCTGGCGATTTCTGTGGCGAAGAACTCTTGACATGGGCATTGGACCCACGACCAAGTGTAATTCTTCCTTCTTCAACTAGAACTGTCAAAGCCATCTCTGAAGTGGAAGCCTTTGCTCTCATAGCAGAAGACCTCAAGTTTGTTGCATCTCAATTTAGAAGACTACACAGTAAACAACTTAGACACAAGTTCAGATTTTACTCACACCAATGGCGAACGTGGGCTGCATGCTTCATACAAGCTGCATGGAGACGATATAAGAAACGAAAGGAAATTGCTAAACTCAGGACTAAGGAGAATTCAACATGCACAGTTGCTGAACCTGAAACGCCAACGTACGCCGCAAGGCCGGCCAGGAGCAATAGAAAAGGTGTCAACACGCATCCTGCCACGGATTCTGGAGTAGTCACATCGTTGCAGAAACCTGCGGAACCTGACTTTTCTGTCGACGAGTG 2096 0.427 MGFGNSRSVRFQDDLEVAKVPATNGENGMKLKYNIDGTQIPESSSNKNQKKATGKTGKFLKAKVLTRVFSEDYERVKRRILDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPVVRDEACINIGITLEAILTIIRTVADIFYMIQIFMRFRTSYVAPSSRVFGRGELVIDSSKIALKYLCKGFLLDFIAALPLPQALIWFVIPKLRGSTMANTKNVLRFTIIFQYLPRLFLIFPLSSQIIKATGVVTETAWAGAAYNLMLYMLASHFLGACWYLLSIERQEACWRSVCNMEKSSCEYGFFDCHSVQDSRRASWFITSNVTNLCSPDIDFYQFGMYGDAVTSEVTSSAFFNKYFYCLWWGLRNLSSLGQGLLTSTFVGEIVFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWLATRGVDEETLLKGLPLDLQRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEIAKLRTKENSTCTVAEPETPTYAARPARSNRKGVNTHPATDSGVVTSLQKPAEPDFSVDE 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00262 698 SUPERFAMILY cAMP-binding domain-like 413 609 IPR018490 -
Bva09g00262 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 698 - -
Bva09g00262 698 SUPERFAMILY Voltage-gated potassium channels 82 405 - -
Bva09g00262 698 PANTHER - 3 698 - -
Bva09g00262 698 Pfam Ion transport protein 91 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva09g00262 698 ProSiteProfiles cAMP/cGMP binding motif profile. 483 580 IPR000595 -
Bva09g00262 698 CDD CAP_ED 483 614 IPR000595 -
Bva09g00262 698 Gene3D Helix hairpin bin 410 474 - -
Bva09g00262 698 PRINTS EAG/ELK/ERG potassium channel family signature 378 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva09g00262 698 PRINTS EAG/ELK/ERG potassium channel family signature 446 453 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva09g00262 698 PRINTS EAG/ELK/ERG potassium channel family signature 146 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva09g00262 698 PRINTS EAG/ELK/ERG potassium channel family signature 396 405 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva09g00262 698 PRINTS EAG/ELK/ERG potassium channel family signature 352 369 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva09g00262 698 PRINTS EAG/ELK/ERG potassium channel family signature 263 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva09g00262 698 Pfam Cyclic nucleotide-binding domain 506 593 IPR000595 -
Bva09g00262 698 Gene3D Jelly Rolls 481 601 IPR014710 -
Bva09g00262 698 SMART cnmp_10 483 614 IPR000595 -
Bva09g00262 698 MobiDBLite consensus disorder prediction 671 685 - -
Bva09g00262 698 ProSiteProfiles IQ motif profile. 619 648 IPR000048 GO:0005515
Bva09g00262 698 MobiDBLite consensus disorder prediction 653 698 - -
Bva09g00262 698 Gene3D - 92 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00262 Bva-Chr9 1346974 1350585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00262 57 697 Ion Channels AT2G28260 77.535 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00262 K05391 - gmx:100786868 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00262 09 1346974 1350585 Bva07g02385 07 19375079 19379365 BWGD
Bva09g00262 09 1346974 1350585 Bva09g00262 09 1346974 1350585 ECH