Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00243 ATGCTGACAATGCGGTTGCTCTGGTGGCAGCACTTGCCATTGCTTATATTGATACAACTTGTATGGCCCAATAGTTGGACCTACGGTGAAGCTTTCCTCAATTTCAGGAGTTCGTTTGGTGGCCCACAGCAATTCAGATGTAGCATTGCCAAATACCCATGTCAAAGGCAATGGCATTGTCTTGACTGCTATCAACTAAAATATCCAGAAAATCAAGTTAAcggaccaagaaaagaaacggTTGGTGCCACAGTTGGTGCGGTTGTTGCTGCCTTAATCGTGATTATTATCATGGTGATTTTCTATATCTGCTTAATGCGTGTTAGAAGATTAGCGCAAACATCCGAGACTGCATCTTCAATGCCATCTCCAGTTGAATTGGGAATGGGAAACACTTGCGCTCCTTCATGTGATGCACACAAGATAAGGCAATTAACAATACTGGAACTAGAACAAGCCACGCGAAATTTCAGTGAAAGTAATATCATAGGCGGTGGTagatttggtttggtttacaAGGGTTTGCTTCAAGATGGATCTATTGTGGCTTTAAAAAGGCGCTTGTTTGCTCTAACTCAAGATTTCACCCATCAGGTGGAGCAGATAGCTCGCATCCATCAACATCTTGTAAAGCTTGTGGGGTATTACGAAGATAGCCATCAACAATTACTTGTGTATGAATATCTCCATAATGGAAATGTAGGGAATCACCTATATGATAATGATGGTTTACCAATTGGAAAGTTAAACATTCGGCAAAGATTATCCATTGCCTTGGGTGCATCCAAAGGACTAGAGCATCTTCACGGTCGGGATCCTCCTTTGCTTCACACACATTTCAGAACAAGCAATGTTCTTGTGGATGAAAATTTCACTGCAAAGGTTTCTGATTATGgattttgcaaattgcaaaACAATGCTGACCAGGCTGGATCTTCAAATATAGACTGCTTCTTTGACCCAGAGTTGAAGTTTTCACAAAACTTTTCAGAGAAGAGTGATGTGTATAACTTTGgggtatttttatttgaattgactAGTGGATGTGAAGCACTTTACAGAAACCATTCAAACTGTAAGGAAAATCTGGTTTTTCAGGTATCTAAAAATAGCAAGTACTTGGACAAGTTTCTGGACATAACGCTTAGAGACCATGAAAAGTTTGCTGCTATGAAGATAATGGAGTTGGCATTGCTATGTTTAGATGTCAGTTTTAGAAGACCATCTATGAGGCAAATTGTAGCTGAGCTGGAGCAAATTCAACAAACAGAAATTGCTCCCTTACATTCACATAAGATCAATGTGATTGCTGCGGTCACTCTTGGGAGTGAGCTCTTTAAATG 1343 0.3812 MLTMRLLWWQHLPLLILIQLVWPNSWTYGEAFLNFRSSFGGPQQFRCSIAKYPCQRQWHCLDCYQLKYPENQVNGPRKETVGATVGAVVAALIVIIIMVIFYICLMRVRRLAQTSETASSMPSPVELGMGNTCAPSCDAHKIRQLTILELEQATRNFSESNIIGGGRFGLVYKGLLQDGSIVALKRRLFALTQDFTHQVEQIARIHQHLVKLVGYYEDSHQQLLVYEYLHNGNVGNHLYDNDGLPIGKLNIRQRLSIALGASKGLEHLHGRDPPLLHTHFRTSNVLVDENFTAKVSDYGFCKLQNNADQAGSSNIDCFFDPELKFSQNFSEKSDVYNFGVFLFELTSGCEALYRNHSNCKENLVFQVSKNSKYLDKFLDITLRDHEKFAAMKIMELALLCLDVSFRRPSMRQIVAELEQIQQTEIAPLHSHKINVIAAVTLGSELFK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00243 447 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 70 445 - -
Bva09g00243 447 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Bva09g00243 447 Gene3D Transferase(Phosphotransferase) domain 1 229 438 - -
Bva09g00243 447 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 70 445 - -
Bva09g00243 447 ProSiteProfiles Protein kinase domain profile. 157 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00243 447 Gene3D Phosphorylase Kinase; domain 1 129 228 - -
Bva09g00243 447 SUPERFAMILY Protein kinase-like (PK-like) 149 427 IPR011009 -
Bva09g00243 447 Pfam Protein tyrosine and serine/threonine kinase 161 416 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00243 Bva-Chr9 1235533 1237967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00243 41 422 Receptor kinase-like Gene Family AT1G79620 33.165 7.23e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Bva09g00243 PK_Tyr_Ser-Thr 5.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00243 - - gmx:100815066 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00243 09 1235533 1237967 Bva09g00243 09 1235533 1237967 ECH