Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00236 atggGGAGTGCCGGAAGCAGCAGAGGGGGCCGCCGTAGGCAGCGGAGCCTTCCCCAACCGGAAGTCTCTTCAAATGCAgacaactttctttttgttcattcCGATGCTGCAGTCAATCCCGCACCCCTTCCTACCAACTCCGTTGATGGACCCTATTCCTCTCCGTCTTCGTCCTACGTAGAGCATCAGAAAGCGGTAACAATCCGGAACGATGTGAATATCAAGAAGGAGACGCTGCGAATTGAACCCGATGAAGATAATCCTGGCAATTTCCTAGTAGCTTTCTCCTTTGATGCTACTGCACCTGGAAGCATTACGGTTATGTTTTTTGCGAAGGAAACTACAGACGGTAGGCTGATAGCAGTAAAGAATATCATGCTAAAACAAGTCTCAATGCCGTTTCAGCAAGGTCTCAGTCAGAAGTTTAAGCAACCTTCTGGAACTGGTATTGACTTCTCCGTGTTGGAGGATACAGAACTGGAAAAAGAAGGAGACATGGAAGTTTATCCTCTAGTGTTGAAGGCTGAAACTGATGGAAATTCATCACATAATTGTCAAGTCACACTGGCAAGTTTCgagaggagagagaagggCGAGTATGAGGTCCAGGTAATGAAGCAGATTCTCTGGGTTAAAGGTCAGAGATATGAGCTGCAGGAGATATATGGAATTGGGAATACTGGTGATGGTGATCTTGATGGCAATGATTCTGGAAGAGAATGTGTTATTTGCTTGTCAGAACCGCGCGACATAACTGTCCTCCCTTGCCGACACATGTGCATGTGCAGTGGCTGTGCGAAGCTTTTGAGGTCCCATACAGACAGCTGCCCCATATGTCGACACCCAGTTGAGCGACTCATGGAAATCAAAGTGGGTAATGGACTTGCTGATCCTTA 896 0.4509 MGSAGSSRGGRRRQRSLPQPEVSSNADNFLFVHSDAAVNPAPLPTNSVDGPYSSPSSSYVEHQKAVTIRNDVNIKKETLRIEPDEDNPGNFLVAFSFDATAPGSITVMFFAKETTDGRLIAVKNIMLKQVSMPFQQGLSQKFKQPSGTGIDFSVLEDTELEKEGDMEVYPLVLKAETDGNSSHNCQVTLASFERREKGEYEVQVMKQILWVKGQRYELQEIYGIGNTGDGDLDGNDSGRECVICLSEPRDITVLPCRHMCMCSGCAKLLRSHTDSCPICRHPVERLMEIKREWQAV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00236 296 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g00236 296 PANTHER MAHOGUNIN 1 291 IPR045194 GO:0061630
Bva09g00236 296 PANTHER - 1 291 - -
Bva09g00236 296 SMART ring_2 241 279 IPR001841 -
Bva09g00236 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 289 IPR013083 -
Bva09g00236 296 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 240 280 IPR045195 -
Bva09g00236 296 Pfam Zinc finger, C3HC4 type (RING finger) 239 285 - -
Bva09g00236 296 ProSiteProfiles Zinc finger RING-type profile. 241 280 IPR001841 -
Bva09g00236 296 SUPERFAMILY RING/U-box 240 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00236 Bva-Chr9 1200181 1202751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00236 57 260 C3H Transcription Factor Family AT3G09770 59.817 7.19e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00236 - - zju:107411342 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00236 09 1200181 1202751 Bva09g00236 09 1200181 1202751 ECH