Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00234 ATGCTTACTAAGAGTTATTCTATTGCCAAAGCTATGGGATGTTGTAATTGTTTTGGGTTCATCAGAAAACCTAAACGTCCAAGTGCCAAGACTAGCACAAGCAATAATCTCTCTGAAGAGCTATTGTTCCATGAAGACatagaagatgatgatgtcTCATATAATGGCGAGGCTACTAACTCTGTTTGTGGAGATGATAGTGAAGTACCAATTCGAGCCAAACGTTCTGAGGAAATTTTGAACTTTAGAGCAGAGAATGGTATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACCAAGTCCTTTGCACAGAGgatgaaaatgggaaaaagatGGTAAATGAGTATGTTCGTGGGTACAAGATTGGTTCTGGTAGCTATGGGAAAGTGGTTCTATATCAAAATCTTGTAGATGGAAATTACTATGCACTTAAGGCCTTTCATAAGTCTCATTTACTGAAGCTTCGAGTTGCACCCTCAGAGACTGCCATGACTGATGTGCTGCGGGagGTTCTTATTATGAAAATGTTGGAACATCCTCATATCGTTAATCTCATTGAAGTGATTGATTCCCCAGAGTCGGATCGCTTCTACATGGTGCTTGAATATGTGGAAGGCAAATGGGTATGTGAGGGCACTGGTCCTGCTTGTGGCTTAGGTGAAGAGACTGCTAGGAAATACATGCGGGATATAGTCTCAGGATTATCATATCTCCATGATCATAATATAGTGCATGGCGATATAAAACCTGATAATCTGTTGGTTACACGTCATGGTACTGTAAAGATTGGGGACTTCAGTGTGAGCCAGGCTTTCGAGGATGATAATGATGAGCTTCGTCGATCACCTGGTACTCCTGTTTTCACTGCACCTGAATGTTGTTTAGgtCTTACCTACCATGGTAAAGCTGCAGACACATGGGCGGTAGGAGTTACATTGTACTGTATGCTGTTGGGTCAATACCCATTTCTTGGAGACACACTGCAGGATACATACGACAAAATAGTCAATAATCCTATAGTACTACCCGACGATATGAACCCACAGCTAAAGAATTTGCTAGAAGGACTACTTTGCAAAGACCCTAGAATGAGGTTGACGCTGCGTGATGTTGCAGAGCATAGCTGGGTTATTGGAGAATATGGGCCAATTCCTGGGTACTCGTGTTGGTGCAAACGCAAGAACTCGGAGAGGGCAGACTCTGATAGGAGCGATATACTTGGTTG 1226 0.4135 MLTKSYSIAKAMGCCNCFGFIRKPKRPSAKTSTSNNLSEELLFHEDIEDDDVSYNGEATNSVCGDDSEVPIRAKRSEEILNFRAENGMICRQFPVKETHQVLCTEDENGKKMVNEYVRGYKIGSGSYGKVVLYQNLVDGNYYALKAFHKSHLLKLRVAPSETAMTDVLREVLIMKMLEHPHIVNLIEVIDSPESDRFYMVLEYVEGKWVCEGTGPACGLGEETARKYMRDIVSGLSYLHDHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMLLGQYPFLGDTLQDTYDKIVNNPIVLPDDMNPQLKNLLEGLLCKDPRMRLTLRDVAEHSWVIGEYGPIPGYSCWCKRKNSERADSDRSDILG 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00234 408 ProSiteProfiles Protein kinase domain profile. 116 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00234 408 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 405 - -
Bva09g00234 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Bva09g00234 408 Gene3D Transferase(Phosphotransferase) domain 1 106 403 - -
Bva09g00234 408 SMART serkin_6 116 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00234 408 SUPERFAMILY Protein kinase-like (PK-like) 101 383 IPR011009 -
Bva09g00234 408 Pfam Protein kinase domain 116 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00234 408 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Bva09g00234 408 CDD STKc_LKB1_CaMKK 122 377 - -
Bva09g00234 408 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00234 Bva-Chr9 1188599 1193881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00234 110 384 CBL-interacting serine-threonine protein kinases AT5G35410 34.296 1.36e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Bva09g00234 Pkinase 1.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00234 K00908 - zju:107411351 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00234 09 1188599 1193881 Bva09g00234 09 1188599 1193881 ECH