Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00226 ATGGAGGGAAGCTCTAATAATTACACTTTTCCGCCTGGTTTCAGGTTCCATCCATCTGATGAGGAGCTCATAGTTCATTACTTGCAAAACAAACTCTGTTCGCGTCCACTTCCTGCATCTATTATTGCTGAAATAGATCTGTATAAGTATAATCCGTGGGAGCTACCCAGTAAAGCTTTGTTTGGGGAAGATGAATGGCATTTCTTTAGCCCGAGAGAGAGGAAGTATCCAAATGGAGCAAGGCCAAACAGGGCAGCAGCATCAGGATACTGGAAGGCAACAGGAACAGACAAGCCAATTCTCAGTTCTTGTGGATTGAAGCGCATAGCAGTCAAAAAGGCTCTCGTTTTTTACTCAGGACGACCTCCTAAAGGGATTAAGACAGATTGGATAATGAACGAATATAGATTAATCGACGCAACCAGTAAACCCTCCAGTTTAAAAGCCTCCATGCGATTGGACGATTGGGTTCTATGCCGGGTTCGACACAAAGGCTACCACTCATCATCAAAGAATAATTGTGGGAATCGGGGGAACAACGTTGGACCCGTATTGGCACCACATCCATACACGCACCAGCACCAGCACCAGGGATATCCAACAACCAAAAATGTTCAGGCTCAGATCGCAAACTATCAATATAAAGACTATCATCTCTTGGCTTCTATTCTTGTTGGTCAACCGATATCTCCCACTGAGAACGTGTCAAATGGTGGCTATAAAGGCAGCAACAGTCATGCTTCGGTTTCTGATGATGGTTTAGATCAAATGAATCCTCAAACAAAAGTTACCGGTTACTTTGACCctctgaaaagaaaatctaacGAGGATAATCAGTATGGAAAtctcatttcttttgacaGGAAGCTTAGCATTGAAAACCAAATAGACGATTTTCCTTCCAAGTTGTTGACCACTGGTGATATAGATTACTATAGCCAAAATCAGTCTAAAGATGACATTCTCAATCCAAGTCCAGCAGATCATAGCATCAATTTTCAAGAATTGAATGAATTGACATTCACAGGAAGTTTTCTGCGATG 1043 0.4104 MEGSSNNYTFPPGFRFHPSDEELIVHYLQNKLCSRPLPASIIAEIDLYKYNPWELPSKALFGEDEWHFFSPRERKYPNGARPNRAAASGYWKATGTDKPILSSCGLKRIAVKKALVFYSGRPPKGIKTDWIMNEYRLIDATSKPSSLKASMRLDDWVLCRVRHKGYHSSSKNNCGNRGNNVGPVLAPHPYTHQHQHQGYPTTKNVQAQIANYQYKDYHLLASILVGQPISPTENVSNGGYKGSNSHASVSDDGLDQMNPQTKVTGYFDPLKRKSNEDNQYGNLISFDRKLSIENQIDDFPSKLLTTGDIDYYSQNQSKDDILNPSPADHSINFQELNELTFTGSFLR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00226 347 ProSiteProfiles NAC domain profile. 10 164 IPR003441 GO:0003677|GO:0006355
Bva09g00226 347 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Bva09g00226 347 SUPERFAMILY NAC domain 6 164 IPR036093 GO:0003677|GO:0006355
Bva09g00226 347 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 316 - -
Bva09g00226 347 Gene3D NAC domain 19 168 IPR036093 GO:0003677|GO:0006355
Bva09g00226 347 PANTHER NAC TRANSCRIPTION FACTOR 56 5 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00226 Bva-Chr9 1152516 1153799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00226 10 164 NAC Transcription Factor Family AT1G61110 70.552 4.33e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g00226 NAM 8.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00226 - - gmx:100817193 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00226 09 1152516 1153799 Bva09g00226 09 1152516 1153799 ECH