Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00225 ATGAGCGTACTCGACCTTATCTTTCGAGTCGATTCAATATGCCAGAAATATGAGAAGTATGATATTGATAAGCAGCGGGAGCTCAATGCTTATGGTGACGATGCCTTTGCTCGTCTCTATGCCACTGTCGATAATGCCATTCAAGCCGCTCTCAGTAAATCTGAGGCGGCTTCTAAGGAGAAGAATAGAGCAGCTGCTGTAGCATTGAATGCTGAAGTCCGTCGTATTAAAGGTCGACTCATGGACGAAGTTCCTAAACTGCGCAAACTGGTGAAAAAGAAGGTTAAGGGTCTCACTGATGAAGACATAGCCATTCGTAATGAGATGGTTCTATCATTGCCAGAGAGGATCCAAACAATACCAGATGGTACTGCGGCTGCAGCTAATGAATCCGGAGGATGGTCAGCTACCGGATCTCATCAGCAAATCAAGTTTGACTCAACAGGCCCGGTTGGAGATCTTGACAGTGAGTTTTTCCAACAATCTGAAGAATCAAGTCAGTTTAGGCATGAATATGAAATGCGGAAAATGAAACAGGATGAAGGACTTGATATCATATCAGAGGGATTGGATACTTTAAAGAATTTGACCCAAGATATGAATGAGGAATTAGATCGGCAAGTTCCATTAATGGATGAAATTGATACAAAGGTGGATAAGGCAACATCTGATATTAGAAATACTAACGTAAGGCTGAAGAAGACTATCACCGAGCTGAGATCTAGTCGAAATTTCTGCATTGACATCATTCTGCTGTGCGTTCTTCTTGGCATTGCTTCCTATTTGTATAATATACTGAAGTG 803 0.4197 MSVLDLIFRVDSICQKYEKYDIDKQRELNAYGDDAFARLYATVDNAIQAALSKSEAASKEKNRAAAVALNAEVRRIKGRLMDEVPKLRKLVKKKVKGLTDEDIAIRNEMVLSLPERIQTIPDGTAAAANESGGWSATGSHQQIKFDSTGPVGDLDSEFFQQSEESSQFRHEYEMRKMKQDEGLDIISEGLDTLKNLTQDMNEELDRQVPLMDEIDTKVDKATSDIRNTNVRLKKTITELRSSRNFCIDIILLCVLLGIASYLYNILK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00225 267 Pfam SNARE domain 210 259 IPR000727 -
Bva09g00225 267 Gene3D - 173 234 - -
Bva09g00225 267 SUPERFAMILY SNARE fusion complex 167 234 - -
Bva09g00225 267 SMART tSNARE_6 168 235 IPR000727 -
Bva09g00225 267 PANTHER SYNTAXIN-72 1 264 - -
Bva09g00225 267 PANTHER SYNTAXIN 1 264 IPR045242 -
Bva09g00225 267 CDD SNARE_Qc 178 234 - -
Bva09g00225 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00225 Bva-Chr9 1149273 1152101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00225 1 267 SNARE and Associated Proteins AT3G09740 65.799 3.06e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00225 K08506 - gmx:100777251 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00225 09 1149273 1152101 Bva09g00225 09 1149273 1152101 ECH