Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00209 ATGGAGTGCAGTGATTCAAACAACAACACTGCTTCACCCCCTCTTTCTCAGTCTCCCacttcatcatcttctccttctccacAAGTTGTGGCGAGTCCTTGTGCTGCATGTAAGATTTTAAGGCGTAGATGTGCTGAAAAATGTGTGTTGGCACCCTACTTCCCACCCACTGAGCCTGCCAAGTTCACCATTGCTCACCGTGTCTTCGGTGCCAGCAACATCATCAAGTCCTTGCAGGAACTTCCAGAAGCTCAAAGAGCTAATGCTGTGAGCAGCATGGTTTACGAGGCCAGCGCAAGAATAAGGGACCCAGTGTATGGTTGCGCGGGTGCGATTTGCCAGCTCCAGAAGCAAGTGAATGAGCTGCAAGCACAGTTAGCCAAGGCACAAGCAGAGCTTGTAAACATGCAACTTCAGCAAGCCAATCTTGTGGCTCTGCTTTGCGTGGAAATGTCACAAACTCCACAGGAATCATCACCTCAGCAATCGGTGGACGATTTCATTTCAAGTCTTCCCCATTACAGCAGTGCCTACCAGAGCAACCTCAACTTTTCCGAAGAAAACAATAGCCTAAACTCAATGTGGGAGCCTCTTTGGACATG 602 0.4718 MECSDSNNNTASPPLSQSPTSSSSPSPQVVASPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKSLQELPEAQRANAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALLCVEMSQTPQESSPQQSVDDFISSLPHYSSAYQSNLNFSEENNSLNSMWEPLWT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00209 200 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Bva09g00209 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 197 - -
Bva09g00209 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 19 197 - -
Bva09g00209 200 Coils Coil 112 139 - -
Bva09g00209 200 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Bva09g00209 200 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00209 Bva-Chr9 1061769 1063115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00209 28 200 AS2 family AT1G07900 63.842 5.92e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva09g00209 LOB 1.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00209 - - ccaj:109798760 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00209 09 1061769 1063115 Bva07g02437 07 19679145 19680758 BWGD
Bva09g00209 09 1061769 1063115 Bva09g00209 09 1061769 1063115 ECH