Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva09g00205 | ATGCAGACCCCCAAGTCAAGAGGTAGCTCTTCCTCTGAAGTGCCCCAAAAGGTGTCACCTCGAGCTGTGCGCCAACTCAGACCTGCCGCCCTAGAAACTAATTCTGCATCATCTATTACTCAAGCTAGTAAAACATCAAAAGAGAGAAGTCCCAAAATTAATGAGCGCAGATCGCCCAGAAGTCCAGTTCCGGAGAGAAAGCGCCCCAGCAGAATATCTGAATTAGAGTCTCAGATTTCTCAACTTCAGGAGGATTTGAAGAATCTGAGGGAACAGCTCATTTTATCTGaatcatgcaaaaaaaaagcTCAGCAAGATGCTGAGGAGTCCAGGGAGCAATTGTTGGCCCTATCTGCAAAGCTTGAAGATTCTCAAAAGCAGCTTGCAGAGTTGTCCGCTTCAGAAGAAGCTCGTGTTATTGAGCTCCAACAAATCTCAGAAGAACGTGATAAGGCATGGCAATCCGAGCTCGAATCTGCTCAAAAGCAGCACTTGATGGACGCTGCATCCCTGGCCTCTGCCATGAATGAAGTTCAGCAGCTTGAGATTCAGCTTGAATTGGTAACGAACTCTGAGAATGCACAAACCCAACATGCAGAAACCACAGACGTGGaacaaaaaaatctgaaacaaAACTTAGCAGAAGCTCTTTCTCTTGTGGAAAACATGAAAGGCCAACTGAAGGATTGCAAAGAATCAGAAGCTCAGGCCCGAGCTTTGGTTGTTGAAACTTTCCTGCAACCTGAGGCTGCAGAAAGAACTGTGGAGTTTCTAAGGGCTGATGCTGCTAAAGCTATAGAAGGTTACAACTCGATTGCTTTAGAGTTAGAGCAGTCAAGAGCACGGGTGAGCTCACTAGAATCACTAGTAAGCAAACTTAATAGAGACTTCATGAGTGAATGTTGCCATGCTGGAAATGTTGCGAATGGCTATAACCTTGCTTATGAACCTGAGAAGTTGGAAGAGGGCGAGGAACCAAATCAGATTAAAACACAACTTTGTTCCTTGAAGTCCGAGGTACGACAACTTAGATCTGCCTTAGAAACTGCTGAGAGTAAATACCAAGAAGAACAGATCCGGAGCACGGTACAGATAAGGAATGCCTATGAAATGGTAGAGCAGGTAAAATCAGAATCAAGTCAGCGGGAATCTGAGCTAGTGGCTGAactgaagaaaacaaaatctgaCATTGAAGAATTCAAGGCTAATCTGATGGATAAGGAAACTGAGTTGCAAGGCATTGTAGAGGAGAATGAGGGTTTGAATTTGAAGCTTGAAAAGAGCATGTCATCTCAGAGAGAAGATAACCTTAAAAGATTAGACGAACGCGTAGCTGAATTGAAGGCTGATCTGATGGATAAGGAGACCACATTGCAGAGTATATCAGAAGAGAATGAAATGCTTAAATCGGAGATCAACAAGAGGCTTAGTGATGGTGGCAAAGTGAGAGGGGAAGTGGCTGCAGAAGTAGAGGCAGCAAAGGCAGCTGAACGCGAGGCTCTCATGAAACTTGGGAGTGTGATGGAGGAAGCGGATAGAAGCAAGGTGAAGGCAACAAGGGTGGCGGAGCAGCTGGAAGCAGCACAAAAAGCAAACTCAGAAATGGAAACAGAACTGAGAAGGCTGAAGGTGCAGTCTGATCAGTGGAGGAAGGCTGCAGAGGCAGCAGCCGCTATGCTTTCAGCAGGAAACAATGGGAAGCTCACAGAACGAAGCGTGTCTTTGGACAGCCACTATAACCATATGGAGAGGTGTTCTCCTTATCCTGAAGACATTGATGATGATTTTCACaggaagaaaaatggcaaCATGCTGAAGAAGATTGGCGTATTATGGAAGAAGCCTCAAAAGATAGGGTTTACGATTGTGTTCTCGTTGGCGGCCTTAGCACTCAGCAGCACCTTCTCATTCTCGGTCCGGAACACAGAGGCTAGAGAACAGTTGGTTAACCGCACCGTCATCATGGGGAAAACACGTGGTATGGGAGCTGCCCGCAAGTTGAAGTCCCACCGAAGAAGGCAGAGGTGGGCTGACAAGTCATACAAGAAATCCCATCTTGGCAATGAATGGAAGAAGCCATTTGCGGTTCCTCTCATGCTAAAGAATGCTTGGATGACTGCCTTTTACAGTGGGATTGAGGCTAAGCAACCAAACTCTGCTATTAGAAAATGTGCTCGAGTACAGTTAATTAAGAATGGAAAGAAGATTGCAGCCTTTGTGCCAAATGATGGTTGCTTGAACTCTATCGAAGAAAATGATGAGGTGCTGATTGCAGGATTTGGACGAAAAGGGCACGCTGTGGGAGATATCCCTGGAGTCAGGTTCAAGGTTGTGAAGGTATCTGGGGTATCTCTACTGGCACTTTTCaaagagaagaaggagaagccAAGGTCTTA | 2396 | 0.4424 | MQTPKSRGSSSSEVPQKVSPRAVRQLRPAALETNSASSITQASKTSKERSPKINERRSPRSPVPERKRPSRISELESQISQLQEDLKNLREQLILSESCKKKAQQDAEESREQLLALSAKLEDSQKQLAELSASEEARVIELQQISEERDKAWQSELESAQKQHLMDAASLASAMNEVQQLEIQLELVTNSENAQTQHAETTDVEQKNLKQNLAEALSLVENMKGQLKDCKESEAQARALVVETFLQPEAAERTVEFLRADAAKAIEGYNSIALELEQSRARVSSLESLVSKLNRDFMSECCHAGNVANGYNLAYEPEKLEEGEEPNQIKTQLCSLKSEVRQLRSALETAESKYQEEQIRSTVQIRNAYEMVEQVKSESSQRESELVAELKKTKSDIEEFKANLMDKETELQGIVEENEGLNLKLEKSMSSQREDNLKRLDERVAELKADLMDKETTLQSISEENEMLKSEINKRLSDGGKVRGEVAAEVEAAKAAEREALMKLGSVMEEADRSKVKATRVAEQLEAAQKANSEMETELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSVSLDSHYNHMERCSPYPEDIDDDFHRKKNGNMLKKIGVLWKKPQKIGFTIVFSLAALALSSTFSFSVRNTEAREQLVNRTVIMGKTRGMGAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAVPLMLKNAWMTAFYSGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNSIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS | 798 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva09g00205 | 798 | PANTHER | INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 | 1 | 617 | - | - | |
| Bva09g00205 | 798 | ProSitePatterns | Ribosomal protein S12 signature. | 715 | 722 | IPR006032 | GO:0003735|GO:0005840|GO:0006412 | |
| Bva09g00205 | 798 | PANTHER | INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED | 1 | 617 | IPR029688 | - | |
| Bva09g00205 | 798 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
| Bva09g00205 | 798 | MobiDBLite | consensus disorder prediction | 30 | 47 | - | - | |
| Bva09g00205 | 798 | CDD | Ribosomal_S23 | 680 | 795 | IPR005680 | GO:0003735|GO:0006412|GO:0015935 | |
| Bva09g00205 | 798 | Coils | Coil | 72 | 134 | - | - | |
| Bva09g00205 | 798 | Coils | Coil | 171 | 191 | - | - | |
| Bva09g00205 | 798 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Bva09g00205 | 798 | Coils | Coil | 206 | 233 | - | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva09g00205 | - | - | gmx:100798862 | 781.171 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva09g00205 | 09 | 1039826 | 1047890 | Bva07g02440 | 07 | 19694424 | 19700130 | BWGD | |
| Bva09g00205 | 09 | 1039826 | 1047890 | Bva09g00205 | 09 | 1039826 | 1047890 | ECH | |
| Bva03g02430 | 03 | 20673522 | 20675800 | Bva09g00205 | 09 | 1039826 | 1047890 | ECH | |
| Bva04g02613 | 04 | 23225122 | 23226844 | Bva09g00205 | 09 | 1039826 | 1047890 | ECH | |
| Bva13g01915 | 13 | 15568280 | 15569754 | Bva09g00205 | 09 | 1039826 | 1047890 | ECH |
Showing 1 to 5 of 5 entries