Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00204 ATGGATCCCTCAAGTGGACAACACCAGATGTCTAACCAATCACTGGAGAACATGTTAGCTTGCTCGAAAGGGAAGCAGGAGGGGAAGCCAAGGCCTCAGCCAGAACAAGCTCTGAAATGCCCAAGATGTGACTCAACCAACACAAAATTCTGCTACTACAACAATTACAGTCTTTCTCAGCCAAGATATTTCTGCAAGTCTTGCAGGAGATATTGGACCAAAGGTGGAACACTGAGGAATGTTCCAGTGGGTGGAGGGTGCAGGAAGAACAAAAGGTCATCATCTGCAACGTCAAAAAGGGCTCCAGATCAAACACTCACACCCAATACCAACCCGCTCTCTAATCTCCCTCCATTATCCTATGACTCCGGTGACCTCACCCTTGCCTTATGTAGGCTCCAAAAGCAATCGTGTGGGCAATTGGGGTTTGAGGAACatgatttttctgttttaggAAATCCCACAAACACCCATTGTGATATTATGGGCAACCCAGGAATGAACTCATCATCCACTAACCCTGGTTTTTTAGATGCACTTCGAAATGGGTTCTTAGAAAACCAGAATAATCTTCAGAATCTCTACTATGGGTATGCAAATGGGGACTTGGGAGAGGTTGATAATGGGAATGCTTGCGGGGTAGGAGTTAGTGGAGAGATGATTTCACCTTATGATCAAGAAATGAGCAATGCCACAACTCAAGCGGTGACCGTGACTACCATGAAACAAGAATTGTGCAATGCCAGAGaacaaagtgaaaataagGTTTTGTGGGGTTTCCCATGGCAACTCAATGGTGACACAAACATGGGTGAACTTGATTCTGTAAGAGCAAGTTGGAACGGTTTTACACCATCTTGGCATGGCCTTCTCAATAGTCCCCTAATGTA 890 0.4393 MDPSSGQHQMSNQSLENMLACSKGKQEGKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSATSKRAPDQTLTPNTNPLSNLPPLSYDSGDLTLALCRLQKQSCGQLGFEEHDFSVLGNPTNTHCDIMGNPGMNSSSTNPGFLDALRNGFLENQNNLQNLYYGYANGDLGEVDNGNACGVGVSGEMISPYDQEMSNATTQAVTVTTMKQELCNAREQSENKVLWGFPWQLNGDTNMGELDSVRASWNGFTPSWHGLLNSPLM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00204 296 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 7 295 - -
Bva09g00204 296 MobiDBLite consensus disorder prediction 83 117 - -
Bva09g00204 296 MobiDBLite consensus disorder prediction 97 117 - -
Bva09g00204 296 MobiDBLite consensus disorder prediction 1 20 - -
Bva09g00204 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 295 IPR045174 GO:0003700|GO:0006355
Bva09g00204 296 MobiDBLite consensus disorder prediction 1 38 - -
Bva09g00204 296 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Bva09g00204 296 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Bva09g00204 296 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00204 Bva-Chr9 1036572 1038336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00204 1 296 C2C2-Dof Transcription Factor Family AT2G28510 40.367 2.93e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva09g00204 zf-Dof 6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00204 - - tcc:18590106 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00204 09 1036572 1038336 Bva07g02442 07 19703648 19706159 BWGD
Bva09g00204 09 1036572 1038336 Bva09g00204 09 1036572 1038336 ECH