Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00201 ATGGTTCTCGGGAAAATGGAACAGTTCATAGACAACTTGCCGCCAATGGATCTTATGCGCTCTGAGAAGATGACTTTCGTTCAACTCATCATTCCTGTTGAGTCCGCTCACAGAGCCATAACGTACCTCGGCGAACTTGGCCTCATGCAATTCCGTGATTTAAATGCTGAGAAGAGCCCCTTCCAGAGGACGTTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTAAGATTTTTCAAGGATCAAATCAATAAAGCTGGTGTAAtgtcttcttctcttcatgGCTTGCAACCAGATATTGAATTGGAGGAACTAGAGATACAACTTGCTGAGCATGAACACGAGCTTATTGAAATGAACTCTAATAGTGAGAAACTTAGGCAATCATATAACGAGCTCCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGTGTCAAGTCATAGCCATGCTGTTTCAGATGAGAGAGAACTGGAGGAGAATGTATACTCAAACGATGACTATGTTGATTCTGCATCTTTGCTTGAACAGgaaATGAGGCCCAGACCATCAAACCAATCTGGTTTAAGATTTATCAGTGGGATAATTTCTACAGCCAAGGTTCTTAGATTTGAAAGGATGTTGTTCCGTGCTACAAGAGGCAACATGCTTTTCAATCAGGCACCAGCTGATGAGCAAATCATGGATCCTGTTTCCACTGAGatgatTGAGAAAACAGTTTTTGTTGTGTTCTTCTCTGGGGATCAAGCAAGAACTAAGATTCTGAAAATCTGTGAGGCGTTTGGTGCAAATTGTTATCCTGTACCTCAAGATACAAGTAAGCAGAGGCAGATAACTAGGGAGGTTTCATCACGTCTCACCGAGTTAGAGGCAACCCTGGATGCTGGTATTAGGCACCGAAATAAGGCCCTTGCTTCCCTAGGGAGTCATCTAGCAAAATGGATGGTTATGGTAAGAAGAGAGAAGGCTGTGTATGATACATTGAATACACTAAATTTTGATGTTACCAAGAAATGTCTTGTTGGAGAGGGCTGGTGTCCCATTTTTGCAAAAACACAGATTCAGGACGCACTGCAACGTGCTACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTTCATCCGATGGATGCAGCAGAATCACCGCCTACATATTTTAGAACCAACGGTTTCACAAGTGCATATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCTGTTTACACTGTAATTACATTCCCATTTCTTTTTGCGGTTATGTTTGGGGACTGGGGTCACGGGATCTGCTTGTTGCTGGGAGCATTAGTTCTTATAGCACGTGAAAACAAGCTTAGCAAACAGAGACTTGGAAGCTTTATGGAGATGCTGTTTGGTGGGCGCTATGTGCTTCTTTTGATGGCACTGTTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTCGGCGGGTCTGCTTACAAATGCCGAGATGCTTCATGCAGGGATGCACAAACTGTTGGCTTAATCAAATACCAAGATCCATACCCATTTGGTGTAGATCCCAGTTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAAATGAAGATGTCAATTCTGTTGGGTGTGGTACAAATGAACTTAGGAATCATATTAAGTTACTTCAATGCACGTTTCTTTAACAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTGTTTGGGTATCTTTCCCTTCTCATTATTGTTAAGTGGTGTACTGGCTCTCAGGCGGATCTCTATCATGTAATGATTTACATGTTTTTAAGCCCCACTGACAATCTCGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTGTGTTATTGCTTTTGGCATTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATTCTAAAGAAGATTCACACAGAGAGATTCCAAGGACGCGCTTATGGAATTCTTAATACATCTGAGTTGGATATCGAGATGGAACCAGATTCCGCCAGGCAACATCATGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCATTCCATTGAGTTTGTTTTAGGTGCAGTATCAAATACAGCATCGTATCTTCGACTTTGGGCATTGAGTTTGGCCCACTCGGAGCTTTCTACTGTTTTTTACGAGAAAGTCCTCCTTCTTGCTTGGGGGTATGACAACCTTGTCATTCGGTTGGTGGGGCTAGCTGTTTTTGCCTTTGCAACTGCCTTCATACTACTCATGATGGAGACCCTTAGTGCTTTTCTTCATGCCCTGCGTCTTCACTGGgtagaatttcaaaataaattctacCATGGTGATGGCTACAAGTTCAGACCCTTTTCCTTTGCCTCCTTAGTGGAAGAGGATGACTA 2474 0.4123 MVLGKMEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAITYLGELGLMQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGVMSSSLHGLQPDIELEELEIQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSSHSHAVSDERELEENVYSNDDYVDSASLLEQEMRPRPSNQSGLRFISGIISTAKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMIEKTVFVVFFSGDQARTKILKICEAFGANCYPVPQDTSKQRQITREVSSRLTELEATLDAGIRHRNKALASLGSHLAKWMVMVRREKAVYDTLNTLNFDVTKKCLVGEGWCPIFAKTQIQDALQRATFDSNSQVGIIFHPMDAAESPPTYFRTNGFTSAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARENKLSKQRLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGGSAYKCRDASCRDAQTVGLIKYQDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVVQMNLGIILSYFNARFFNSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKIHTERFQGRAYGILNTSELDIEMEPDSARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLVEEDD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00201 824 PIRSF ATP6V0A1 14 824 IPR026028 GO:0000220|GO:0046961
Bva09g00201 824 Coils Coil 103 132 - -
Bva09g00201 824 PANTHER VACUOLAR PROTON ATPASE A1 10 824 - -
Bva09g00201 824 PANTHER VACUOLAR PROTON ATPASES 10 824 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bva09g00201 824 Pfam V-type ATPase 116kDa subunit family 42 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00201 Bva-Chr9 1010563 1021176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00201 6 817 Primary Pumps ATPases(2) AT2G28520 81.350 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00201 K02154 - gmx:100793301 1476.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00201 09 1010563 1021176 Bva07g02444 07 19719822 19728954 BWGD
Bva09g00201 09 1010563 1021176 Bva09g00201 09 1010563 1021176 ECH