Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00197 ATGGCTGATCCCAGTCAGGGCGCCGTCTCCGATTTTCCGGCGGTTCCGACACAGGGAGGACAGTATATTCAGTATAACATTTTCGGTAACCTCTTCGAAGTTACGGCGAAATACCGGCCTCCGATCATGCCTATTGGTCGAGGCGCCTACGGAATCGTCTGCTCGGTGTTGAATTCGGAGACAAACGAGATGGTGGCTATTAAGAAGATAGCCAACGCTTTTGATAATCGCATGGATGCTAAGCGTACGCTTCGTGAGATAAAGCTTCTTCGGCATTTGCAGCATGAAAACGTAATGGCTATAAGAGATGTGATTCCTCCACCTTTACGTAGGAATTTTACTGATGTTTACATCGCCGCAGAACTCATGGATACTGATCTTCACCACATCATTCGCTCTAATCAAAATCTGTCAGAGGAACACAGCCAGTACTTCTTGTATCAGATTCTTCGTGgactaaaatatatacattctGCAAACATTATCCATAGAGACTTAAAGCCAAGCAACCtcttgctaaatgcaaattgTGATTTGAAGATATGCGATTTTGGGCTTGCAAGGACGACTATGGAGAATGATTTCATGACAGAATATGTTGTCACAAGATGGTATAGGGCTCCTGAATTATTGTTGAACTCCTCAGATTACACTTCTGCTATAGATGTATGGTCCGTGGGTTGCATTTTTATGGAGCTTATGAATAAAAAGCCTTTATTTCCAGGCAAAGATCATGTTCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACTCCAACTGAGGCTGACGTTGGGTTAGTGAAAAATGAGGATGCAAGAAGATATATCCGACAACTTCCCCAATACCCTCGTCAACCGTTAGCTAGGGTTTTCCCCCATGTTCATCCTTTAGCCATTGATCTCATCGATAGAATGCTGACAATTGACCCCACTAGAAGAATTACTGTTGAAGAAGCATTGGCTCATCCATACCTTGCAAAACTGCATGATGAAACCGATGAACCGGTCTGCCCAGAGCCATTCTCATTTGATTTTGAGGTACAATCACTGGACGAAGAGCAAATGAAGGACATGATCTACAAGGAGGCATTGGCACTCAATCCAGAGTACACATA 1115 0.4269 MADPSQGAVSDFPAVPTQGGQYIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSVLNSETNEMVAIKKIANAFDNRMDAKRTLREIKLLRHLQHENVMAIRDVIPPPLRRNFTDVYIAAELMDTDLHHIIRSNQNLSEEHSQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARTTMENDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTEADVGLVKNEDARRYIRQLPQYPRQPLARVFPHVHPLAIDLIDRMLTIDPTRRITVEEALAHPYLAKLHDETDEPVCPEPFSFDFEVQSLDEEQMKDMIYKEALALNPEYT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00197 371 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
Bva09g00197 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 370 - -
Bva09g00197 371 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Bva09g00197 371 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bva09g00197 371 Pfam Protein kinase domain 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00197 371 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00197 371 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00197 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bva09g00197 371 SUPERFAMILY Protein kinase-like (PK-like) 44 334 IPR011009 -
Bva09g00197 371 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Bva09g00197 371 CDD STKc_TEY_MAPK 32 368 - -
Bva09g00197 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00197 Bva-Chr9 990806 993600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00197 7 370 MAP Kinase Gene Family AT3G45640 82.143 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bva09g00197 Pkinase 5.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00197 K20536 - gmx:547530 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00197 09 990806 993600 Bva09g00197 09 990806 993600 ECH