Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00186 ATGGAACAGTCAGGTAAATCACCAAAACAATCGTCGTTACAAAGACCCGCTTTTCCCAGAGACCCTCGTGGCTCTCTCGAAGTCTTCAATCCTTCCTCCTATGCTGACGACAAACCAACCAACTTGCCATTCCGTTCTCAGCCCAAGTGGAAAAGCTGGTTGGAGCCAGACACCAGCCACGAGCCGGAACCAACCAAGCTCTCCCCTTCCAATTCTAATCTAGCCGATGAAATTACAAGCACTTCATGGATGGCCCTCAAGGAATCACCTTCACAATCGTCATCACTGCCCTCCCAACAGACTATTTCTTTCATTCTCAACGACGGCGCGGAGCCGGGCCAGAAATCGCCAGCCAACACCAACCAATTGTCTGGAGAAGTTGGGGAGGCGGTGCAGAGAGCCGCAGAGTGGGGTCTGGTTCTGAAAACTGACACGGAGACTGGAAAGCCACAGGGAGTGGCCGTTAGGAAATCCGGCGGGGACGAACCGAATGCTAAAGTGGCGGGAACTTCGAGAAGGAACTCGAACAACTCGGTGAGAAGCTCCGGCGACTCGTCAGACGACGGAGGAAGAGAATTCCTCCGAGGAATTCCTAGAGTTTCCGAGGACTTGAGGGACGCTTTATCTGCGTTCCAACAAACTTTTGTTGTCTCCGATGCTACTAAAGCCGATTATCCGATCATGTATGCGAGTGCTGGGTTCTTCAAGATGACGGGTTATACATCCAAGGAAGTCGTAGGGAGGAACTGTCGTTTTTTACAGGGAGCGGATACAGATCCGGAGGACGTGGCAAAGATAAGGGAAGCGTTGCAAGAAGGAAAGAGTTACTGTGGGAGGCTACTCAACTACAAGAAGGACGGGACGCCATTTTGGAACCTTCTCACTATCGCGCCCATTAAAGACGAAAATGGGAAAGTCCTCAAATTTATCGGAATGCAAGTGGAGGTTAGCAAGCATACGGaggggaccaaggaaaagatgcTACGTCCCAATGGATTGCCGGAATCCTTAATTCGATACGATGCCCGTCAGAGAGAGAAGGCTACTAGTTCAGTAACAGAACTGGTCAAGGCCGTGAAGCGGCCCCGAGCACTGAGTGAATCGGCGAATCGTCCTCTGATGAGAAAATCAGGCGGcgacaaagaagaaaagagaacagAAAATGCATCAAGGAGAAAATCAGAGAGTATGGCTTCCTTTAGACGGAAATCACATGGGGGGAATAGACTTTCTATTCAGCGAATCAGTGAGCTGCctgaaaagaaacagaaaaattccCGTCGCCGATCTTTAATGGGcttcattaaaaaaaatcagtccAGTGAGGAAACCTTGGACAATGACTTTCATGAGGAGAGCTCCgagaatgaagaagatgaggaGCCCGACAGTTCAGATGACAAAGTAACGCAtagggaaaagagaaagggtCTTGATCTTGCTACCACTCTTGAACGTATTGAGAAGAACTTCGTCATTACTGATCCAAGGCTGCCCGACAATCCCATTatttttgcaTCTGATAGCTTCCTGGAGCTTACTGAGTACAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGGCCTGAGACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAGCAGAAGTGACTGTGCAACTAATCAACTATACCAAGAGTGGTAAAAAGTTCTGGAACCTGTTTCATCTACAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAGCACGTGGAACCTCTTCGCAACTGTATTGCAGAAGATACTGCAATCGAGGGTGAAAAACTGATCAGAGAAACTGCAGAAAATGTTGATGACGCAGTGAGAGAACTTCCGGATGCTAATTTGACACCAGAAGATTTATGGATTAATCATTCAAAAGTGGTTCACCCAAAACCCCATAGGAGTCAGGACCCGGCCTGGAGAGCTATCCAGAAGATTCTAGATAGTGGAGAACAGATTAGTTTAAAGCATTTCAGGCCAATAAAACCATTGGGAGCTGGGGATACTGgcagTGTGCAACTGGTGGAGCTTTGTGAAACCGGTCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTAAACCGTAATAAGGTGCACAGAGCTTGCACAGAGAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCATTATACGCTTCTTTTCAGACCAAAACGCATGTTTGTCTTGTAACTGATTACTGTCCTGGTGGAGAACTGTTTATGCTTCTGGATCGACAGCCAACAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTACGCTGCAGAGGTAGTAGTTGCATTAGAGTACCTTCATTGTCAAGGTATAATATACAGAGATTTGAAGCCAGAAAATGTGTTACTCCAAAGCAATGGGCATGTCTCTCTGACAGATTTTGATTTATCATGTTTAACCTCTTGCAAACCACAGCTTCTGGTCCCGCTTACAAATgaacagaagaagaagcaacagAAAAATCAGCAGGCTCCAATATTTATGGCCGAACCTATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCCCCGGAAATAATAAAAGGTTCAGGCCATACTAGTGCTGTCGACTGGTGGGCTCttggTATTCTTCTGTATGAAATGTTGTATGGATATACACCATTTAGGGGAAAGACAAGGCAGAAAACATTTGCAAATATTCTTCACAAGGATCTTAAATTTCCCAGAAGTCGACCGGTAAGTCTCCATGCAAAGCAGTTAATGTACCGGTTGTTGCACAGAGATCCCAAAACCAGATTGGGTTCACAGGAAGGAGCAAATGAAATTAAGGGTCACCCATTCTTCCGTGGTGTCAATTGGGCCCTAGTTCGTTGCATGAATCCTCCCGAGCTTGATGCTCCTCTCTTTGGGGCAACTGGAGATGAAAAGAAGCCCAAAGCTGTGGATCCTGCACTAGAGGATCTACAGACGAATGTTTTCTG 3032 0.4396 MEQSGKSPKQSSLQRPAFPRDPRGSLEVFNPSSYADDKPTNLPFRSQPKWKSWLEPDTSHEPEPTKLSPSNSNLADEITSTSWMALKESPSQSSSLPSQQTISFILNDGAEPGQKSPANTNQLSGEVGEAVQRAAEWGLVLKTDTETGKPQGVAVRKSGGDEPNAKVAGTSRRNSNNSVRSSGDSSDDGGREFLRGIPRVSEDLRDALSAFQQTFVVSDATKADYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGADTDPEDVAKIREALQEGKSYCGRLLNYKKDGTPFWNLLTIAPIKDENGKVLKFIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQREKATSSVTELVKAVKRPRALSESANRPLMRKSGGDKEEKRTENASRRKSESMASFRRKSHGGNRLSIQRISELPEKKQKNSRRRSLMGFIKKNQSSEETLDNDFHEESSENEEDEEPDSSDDKVTHREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLRNCIAEDTAIEGEKLIRETAENVDDAVRELPDANLTPEDLWINHSKVVHPKPHRSQDPAWRAIQKILDSGEQISLKHFRPIKPLGAGDTGSVQLVELCETGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLVTDYCPGGELFMLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSCKPQLLVPLTNEQKKKQQKNQQAPIFMAEPMRASNSFVGTEEYIAPEIIKGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSRPVSLHAKQLMYRLLHRDPKTRLGSQEGANEIKGHPFFRGVNWALVRCMNPPELDAPLFGATGDEKKPKAVDPALEDLQTNVF 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00186 1010 SMART serkin_6 677 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00186 1010 PANTHER FLIPPASE KINASE 1-RELATED 146 1010 - -
Bva09g00186 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Bva09g00186 1010 ProSiteProfiles Protein kinase domain profile. 677 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00186 1010 CDD STKc_phototropin_like 675 984 - -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 168 184 - -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 374 402 - -
Bva09g00186 1010 ProSiteProfiles PAS repeat profile. 200 272 IPR000014 -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 359 474 - -
Bva09g00186 1010 Gene3D Phosphorylase Kinase; domain 1 676 760 - -
Bva09g00186 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 492 591 IPR035965 -
Bva09g00186 1010 CDD PAS 491 591 IPR000014 -
Bva09g00186 1010 Pfam PAS domain 223 317 IPR000014 -
Bva09g00186 1010 Pfam PAS domain 499 591 IPR000014 -
Bva09g00186 1010 TIGRFAM sensory_box: PAS domain S-box protein 501 591 IPR000014 -
Bva09g00186 1010 TIGRFAM sensory_box: PAS domain S-box protein 226 321 IPR000014 -
Bva09g00186 1010 Gene3D PAS domain 464 629 - -
Bva09g00186 1010 CDD PAS 227 316 IPR000014 -
Bva09g00186 1010 SUPERFAMILY Protein kinase-like (PK-like) 656 983 IPR011009 -
Bva09g00186 1010 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Bva09g00186 1010 SMART pas_2 202 271 IPR000014 -
Bva09g00186 1010 SMART pas_2 478 547 IPR000014 -
Bva09g00186 1010 SUPERFAMILY PYP-like sensor domain (PAS domain) 221 313 IPR035965 -
Bva09g00186 1010 Gene3D Transferase(Phosphotransferase) domain 1 761 974 - -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 63 127 - -
Bva09g00186 1010 ProSiteProfiles PAC domain profile. 550 604 IPR000700 -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 141 194 - -
Bva09g00186 1010 ProSiteProfiles PAC domain profile. 274 328 IPR000700 -
Bva09g00186 1010 Gene3D PAS domain 214 371 - -
Bva09g00186 1010 ProSiteProfiles PAS repeat profile. 476 549 IPR000014 -
Bva09g00186 1010 SMART pac_2 553 595 IPR001610 -
Bva09g00186 1010 SMART pac_2 277 319 IPR001610 -
Bva09g00186 1010 Pfam Protein kinase domain 679 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00186 1010 PANTHER PHOTOTROPIN-1 146 1010 - -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 448 464 - -
Bva09g00186 1010 MobiDBLite consensus disorder prediction 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00186 Bva-Chr9 903875 914123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00186 17 1010 AGC Kinase Gene Family AT3G45780 71.414 0.0 1382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva09g00186 Pkinase 2.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00186 K20715 - jre:108989640 1539.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00186 09 903875 914123 Bva07g02458 07 19814015 19826155 BWGD
Bva09g00186 09 903875 914123 Bva09g00186 09 903875 914123 ECH