Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00182 ATGTATGCAGCACCCTCCAACGCCACATCCTCGCCCGCCGCCGATTACTTCGGCCATTTGCCGTCGCCAGATGCAACCATGTCCATGCCATTGCCAACAACACTTCTGTCCTCAGCTACACCAATGCACTCCACTTCTCAGTACCACTTCATGCCCGATCAACTCGCCCTCAACGAGTTCGACTCATTGCACGACACGTTCTCCCAATTCAAGTCGGAGATGAGCCACAATAGCAGCAGTAGCGGTTGTAGCAGCTATGGCTCGCCCAGTTCTCTGGCGAGTTACCGAACTCGACGGCCTAATCTTATGCAGAGGAGCGTAAGCAGCCATGCTTTGATGAAGAATGGGGTCCACCACCCTGTTTCCCCGCTATTTGCTGAGTTGTTGGACTCGGAGAACGCTCCGGTTCGGAGAGTTTACAGTACTGGTGATTTGCAGAGAATTATGGGACATAATCATCTGTCAGATAGTTCATTGTCAAGCGAAAGTAGCATGATCATAGAGGGAATGAGCAGAGCCTGTCGTTATAGCCCGGAGGAGAAGAAAGTGAGGATTGAGAGATACAGAAACAAGAGAAACCTGAGGAActtcaacaagaaaattaagTATGCTTGCAGGAAGACATTAGCGGATAGCAGGCCACGCATCAGAGGAAGATTTGCTAGGAATGaagaaattgacaaaaacACAGTTGGGTGGAGCCATATAGGTGGtggagaggaagaagatgaggaAGATGAAAATTGGGTGGACTTGTTTGATTCCTTAGTTGCTGCAAGTCTTGTTCAGGACCCTCAAGATAGTTCTTCATCAGGTCTAATGTTTCAGGACATGTA 836 0.4605 MYAAPSNATSSPAADYFGHLPSPDATMSMPLPTTLLSSATPMHSTSQYHFMPDQLALNEFDSLHDTFSQFKSEMSHNSSSSGCSSYGSPSSLASYRTRRPNLMQRSVSSHALMKNGVHHPVSPLFAELLDSENAPVRRVYSTGDLQRIMGHNHLSDSSLSSESSMIIEGMSRACRYSPEEKKVRIERYRNKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNEEIDKNTVGWSHIGGGEEEDEEDENWVDLFDSLVAASLVQDPQDSSSSGLMFQDM 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00182 278 Pfam CCT motif 183 223 IPR010402 GO:0005515
Bva09g00182 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 43 274 IPR045281 GO:0009909
Bva09g00182 278 PANTHER CCT MOTIF PROTEIN 43 274 - -
Bva09g00182 278 ProSiteProfiles CCT domain profile. 181 223 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00182 Bva-Chr9 875843 878110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00182 177 228 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 1.58e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva09g00182 CCT 3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00182 - - gmx:102661609 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00182 09 875843 878110 Bva07g02461 07 19836191 19837767 BWGD
Bva09g00182 09 875843 878110 Bva09g00182 09 875843 878110 ECH