Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00163 ATGCCGATTTCTAGAATTGCCATTGGAAATGCATCGGAGCTCAGCCAAGGCGATGCTCTTAAGGCCGCACTGGCTGAGTTCATCTCAATGCTCATCTTTGTCTTTGCTGGTGAAGGGTCTGGCATGGCATTCAACAAGCTCACCGACAATGGTGCAACAACACCAGCAGGGTTAGTGGCAGCATCACTGGCTCATGCCTTCGCACTGTTTGTGGCTGTCTCTGTTGGTGCTAACATTTCTGGCGGTCATGTGAACCCTGCTGTTACATTCGGTGCTTTCGTTGGTGGTCACATCACCCTCCTTAGGAGTATTTTGTACTGGATTGCCCAGTTGCTCGGTTCTGTCGTTGCTTGCTTGCTCCTTAAATTCTCCACCGGTGGACTGGAAACATCTGCATTCTCTCTGTCTTCTGGCGTGGGTGCATGGAATGCAGTTGTCTTCGAAATTGTGATGACTTTCGGTTTGGTTTACACTGTATATGCCACTGCCGTTGACCCAAAGAAGGGTAACATCGGGATCATTGCTCCAATTGCAATTGGTTTCATCGTGGGTGCCAACATCTTGGCTGGTGGTGCCTTCGATGGTGCATCAATGAACCCGGCAGTGTCTTTTGGACCCGCTGTTGTTAGCTGGACATGGGCTAACCACTGGGTCTACTGGCTCGGCCCATTCGTGGGTGCTGCCATTGCTGCCATTGTCTACGAGATTTTCTTCATCAGCCCAGACACCCACGAACAGCTCCCAACCGCAGACTACTA 758 0.5092 MPISRIAIGNASELSQGDALKAALAEFISMLIFVFAGEGSGMAFNKLTDNGATTPAGLVAASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWLGPFVGAAIAAIVYEIFFISPDTHEQLPTADY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00163 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Bva09g00163 252 SUPERFAMILY Aquaporin-like 18 242 IPR023271 -
Bva09g00163 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g00163 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
Bva09g00163 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bva09g00163 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00163 Bva-Chr9 767836 769060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00163 1 252 Major Intrinsic Protein MIP AT4G01470 80.159 1.09e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00163 K09873 - mnt:21394129 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00163 09 767836 769060 Bva07g02479 07 19924517 19925741 BWGD
Bva09g00163 09 767836 769060 Bva09g00163 09 767836 769060 ECH
Bva09g00163 09 767836 769060 Bva07g02479 07 19924517 19925741 ECH