Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00145 ATGGCCAAGACATTAATTTCATCTCCTTCTTTCATCGGTACACCACTTCCTTCTATCTCTCGCCACAGTCACCGCAGGCTCGTTGGCACTAGAGTTAAATTCAGCTTCCGCGAAATTTCTCCAATTCACTCGgtaaatttttcctttgatttcCACGAACTTGTGGGTAGAGCTGAAGGCATTCTTTATTCCCTTGCTGACGCCACGGTTGCAGCGGATTCGGGTGCTGATGCAGCAGCAACGAGCTCCGCAAATATTGCTGCACAGAAGAACGGCGGCTGGTTTGGGTTCATATCCGACGGCATGGAATTTGTTCTCAAGGTGTTAAAGGGTGGCCTTGATGCGCTGCATGTGCCTTACTCATATGGATTTGCTATTATATTCCTCACTGTTATTGTTAAAGTTGCTACATTACCCTTGACAAAGCAACAGGTCGAATCAACACTTGCTATGCAAAATCTTCAACCAAAAATCAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGGATACAACTAGAGACATCAAGGTTATATAGGCAGGCTGGGGTTAACCCATTGGCAGGATGTTTCCCAACTTTGGCTACCATACCGGTGTGGATAGGTCTCTACCAAGCTTTATCAAATGTGGCTAATGAGGGACTCTTAACGGAAGGTTTCTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCTGCTCGGCAAAGTGGATCTGGAATTTCTTGGCTTTTCCCATTTGTGGATGGCCATCCACCAATAGGCTGGCAAGACACTGCCGCTTATCTTGTTTTACCTGTCCTCCTTATTGTGTCTCAGTATGTTTCAATGGAAATCATGAAACCACCCCAGACCAATGATCCAGCACAAAAAAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCGCTGTCTGTACCATCAGGACTAACAATTTACTGGTTTACAAACAATGTCCTCAGCACAGCACAACAAGTATGGTTACGCAAACTAGGAGGTGCAAAACCTGTTGTGAATGAAAATGCAAGTGGAATTATTACAGCAGGACGAGCAAAACGATCAGCTTCTCAACCAGCAAGAGCTGGAGAAAGGTTTAGGCAGTCaaaagaagaggagaaaaagaaaaagttcacCAAGGCACTACCAGCAGAAGAGGTCCAACCACTGTCTTCTGCTATGGATTCTGATGATGGTTcagatgaagaaattaatgacAAGGATGAGGAAGTCCCAGAAGAGGCGTATGCTTCTATGGGAAAGAAGGAAGTTCCAAATTATTCTCGGCCAAGAAGTAAGCGGTCAAAGAGGAAGCGTGCTGTATA 1340 0.4291 MAKTLISSPSFIGTPLPSISRHSHRRLVGTRVKFSFREISPIHSVNFSFDFHELVGRAEGILYSLADATVAADSGADAAATSSANIAAQKNGGWFGFISDGMEFVLKVLKGGLDALHVPYSYGFAIIFLTVIVKVATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPIGWQDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPAQKNTLLVFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSASQPARAGERFRQSKEEEKKKKFTKALPAEEVQPLSSAMDSDDGSDEEINDKDEEVPEEAYASMGKKEVPNYSRPRSKRSKRKRAV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00145 446 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 121 335 IPR028055 -
Bva09g00145 446 MobiDBLite consensus disorder prediction 401 415 - -
Bva09g00145 446 MobiDBLite consensus disorder prediction 354 446 - -
Bva09g00145 446 PANTHER OXA1 1 440 IPR001708 GO:0016021|GO:0032977
Bva09g00145 446 MobiDBLite consensus disorder prediction 363 387 - -
Bva09g00145 446 Pfam 60Kd inner membrane protein 122 336 IPR001708 GO:0016021|GO:0032977
Bva09g00145 446 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00145 Bva-Chr9 684410 689252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00145 16 392 Chloroplast and Mitochondria Gene Families AT2G28800 68.170 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00145 K03217 - vvi:100260431 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00145 09 684410 689252 Bva09g00145 09 684410 689252 ECH