Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00137 ATGTTGGCCAGCTTTCATTTGGGCGTACGTGCTTCTCAttcttattactttttaaaccAACAGCGGGCACGGCGAGATCGTGATCGAGATCGGAGATTGACGCCATCTTCGGGTCAGAAAATGGCAGATACTGAGGATATTCAGCCACTCGTTTGTGATAATGGAACGGGAATGGTTAAGGCTGGATTTGCAGGAGATGATGCTCCAAGAGCTGTGTTTCCTAGCATTGTTGGTCGTCCACGTCACACTGGTGTGATGGTTGGCATGGGCCAGAAGGATGCATATGTTGGTGATGAGGCTCAGTCCAAGCGTGGtatattaactttaaaatatccCATTGAGCATGGTATTGTGAGTAACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTTCGTGTGGCCCCAGAGGAACACCCAGTTCTACTTACCGAAGCACCCCTGAATCCCAAGGCTAACCGTGAGAAAATGACCCAAATTATGTTTGAGACCTTCAACACACCTGCTATGTATGTTGCCATCCAGGCTGTTCTCTCCCTGTATGCCAGTGGTCGTACAACTGGTATTGTTCTGGACTCTGGTGATGGTGTCAGCCATACTGTCCCCATCTATGAGGGGTATGCCCTCCCACATGCCATCCTCCGTCTTGACTTAGCAGGACGTGACCTTACTGACGCCCTGATGAAAATCCTAACTGAGCGTGGTTATTCCTTCACAACCTCAGCTGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGCTGGCTTATATTGCCCTAGACTTTGAACAAGAGCTTGAAACTTCAAAAACAAGCTCTGCTGTTGAGAAGAGCTATGAATTGCCTGATGGACAGGTCATCACCATTGGCGCTGAGCGTTTCCGATGTCCTGAAGTCCTTTTCCAGCCATCCATGATTGGAATGGAAGCTGCAGGCATTCACGAGACCACATACAACTCAATCATGAAGTGTGATGTCGATATCAGGAAGGACTTGTACGGAAACATTGTTCTCAGTGGTGGATCTACCATGTTCGCTGGTATTGCTGATAGAATGAGCAAGGAAATCACTGCTTTGGCCCCAAGCAGCATGAAGATCAAGGTGGTTGCTCCACCAGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCTATCTTGGCTTCTCTGAGCACTTTTCAACagATGTGGATTGCAAAGGCAGAGTACGATGAGTCTGGTCCTTCAATTGTACACAGGAAGTGCTTTTA 1253 0.4645 MLASFHLGVRASHSYYFLNQQRARRDRDRDRRLTPSSGQKMADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTSAEREIVRDMKEKLAYIALDFEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFAGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00137 417 Pfam Actin 45 417 IPR004000 -
Bva09g00137 417 PANTHER ACTIN 41 416 IPR004000 -
Bva09g00137 417 ProSitePatterns Actins signature 1. 95 105 IPR004001 -
Bva09g00137 417 PANTHER - 41 416 - -
Bva09g00137 417 PRINTS Actin signature 157 170 IPR004000 -
Bva09g00137 417 PRINTS Actin signature 182 201 IPR004000 -
Bva09g00137 417 PRINTS Actin signature 278 294 IPR004000 -
Bva09g00137 417 PRINTS Actin signature 91 102 IPR004000 -
Bva09g00137 417 PRINTS Actin signature 103 125 IPR004000 -
Bva09g00137 417 PRINTS Actin signature 68 77 IPR004000 -
Bva09g00137 417 MobiDBLite consensus disorder prediction 21 36 - -
Bva09g00137 417 Gene3D - 50 411 - -
Bva09g00137 417 MobiDBLite consensus disorder prediction 21 48 - -
Bva09g00137 417 SMART actin_3 47 417 IPR004000 -
Bva09g00137 417 Gene3D Actin; Chain A, domain 4 222 313 - -
Bva09g00137 417 Gene3D - 180 380 - -
Bva09g00137 417 CDD NBD_sugar-kinase_HSP70_actin 50 223 - -
Bva09g00137 417 ProSitePatterns Actins signature 2. 398 406 IPR004001 -
Bva09g00137 417 ProSitePatterns Actins and actin-related proteins signature. 146 158 IPR020902 -
Bva09g00137 417 SUPERFAMILY Actin-like ATPase domain 189 417 IPR043129 -
Bva09g00137 417 SUPERFAMILY Actin-like ATPase domain 46 195 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00137 Bva-Chr9 638523 641382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00137 41 417 Cytoskeleton Gene Families AT5G59370 96.817 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00137 K10355 - cit:102625586 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00137 09 638523 641382 Bva07g02506 07 20067642 20070360 BWGD
Bva09g00137 09 638523 641382 Bva09g00137 09 638523 641382 ECH
Bva09g00137 09 638523 641382 Bva07g02506 07 20067642 20070360 ECH