Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00136 ATGGAGCTTTTGAAGCCCTCGCATCCTTCTCAGCATGCTGCCACCGGGGACATCTTTTATGGGTTCTCGCTGCCGTCGAGCTTACCTTTAGGCTTTAACGGGTTGGCAACTTCCCATAGGCTCGAACATACGGAAGAATGTGACGAAAAGGTGCATGTAGCGGTTGGAAAAACGGTTAAGAAAGCTGTGAATTTGCTTCAATGGGCTTTCACCCACTTTAGAAACAGAGAAATTCGCATACTTCATGTTTATCAACCTTCTCCTGTGATCCCCACGCTATTAGGAAAATTGCCAGCTACCCAAGCAAACCCTGAAGTCGTGTCTGCTTTTAGAAGAGAGGAAAGAGGACAGACCATGAAGCTTTTGGAATATTACGTGAGCATTTGCCTTGCAGCTAAGGTTAAGGCCAGTATTATGATAGCTGATGCTGACCAAGTCCACGAAGGTATTGTTGATTTGGTGATCAGGCATGGTATTAGGAAGCTTGTTATTGGAGCTGCACCAGAAAATTGTATGAAGGTGAAAGGGAACTCTGGGAAAGCAAAATACACTGCCAAGAATGCTCCCCCATTCTGTGAAATATGGTTTATCTACAAAGGAAAACACACGTGGACCAGAGAAGCTTCCGAAATACCACATTCTTTGCCGTCATGTACTCAACCTGTAATTTCAGCTGCAGGAAGCATGAGATCTAGATCATTTCAATATGCTAGGAGTGAATTATTTAACTCAGAGAGGCTACAATCAAATTCTGCAAGAGCTGAAATCTGCAATGGAATTGGTAGTTGGGTTCAGGGTGGAAAAGTTGAGACGGAAACAGCTTTTTCAACCTCAACATCAAGTCGTACCAGTAATTCTTCCCCCCTGATTTCTGTTGGGAGAGATGAGTATTTAGTTTCTCCGTCACAGGTTGAGGAAGAAAGACTTAATGATCAACTTATTGAAGCTAAAACAGAAGTTGAGGCAGCACGAGACAAGGCATTTGCAGAGCTATTAAAATGCAAAAGGTTGGAATCAGAAGCAATGGAGCACATTAGAAGGGTCAATTTGTTTGAATCTGCCCATGGATGTGAATTAAAGCTCAAAAAGGAGACAGAAGGTGCACTGCAAGATGTAATACAGGAACAAGAAAAGCTCTTGGTTGAGAATGAAGAAGTTGCAAATGAGCTACAGAGGACCATGAGAAATGTTGCTCTTCTAGACAGTCGTGCACAGGAAGCAAACCGTAGGCGAGATGAAGCTGCAGATGAGTTAAGATTAATTCAAGCTTCCATATCAACTTTGTGGCATGAAAAGCGGCAGATCAGGCAACAGAAAATGGTAGCCCTCCGCTGGCTTGAGCAGTGGAGAAGTTGTGGACAACTTGGAGCTGCACACTGCAATGGGGTCATTGGGTTTGCTGAAGGATTGCCTGAGTTGGCTGAATTTTCATTGTTAGATCTTCAAAATGCAACGTGCAATTTTTCTGAGAGCTTCAAGATCAAGCAGGGAGGGTATGGTTCTATTTATAAGGGGGAAATGTCGGGTAAAACTGTTGCTATAAGGAAACTTCATATGCATAACATGCGAGGACCAGCAGAATTTCATCAAGAGGTTCAAATCCTAGGTAGTCTCCGGCACCCTCATCTTTTGACGTTGCTTGGTGTTTGCCCTGAAGCCTGGTCACTTGTATACGAGTACTTGCCCAATGGGAGCCTTCAAGACTACCTGTTCCGAAAAAGCAACGCTTCCCCTTTGACATGGAATAACCGAGTGCGGATGATTGCTGAAATTGCTAGTGCTATCTGCTTCTTACACTCTTCCAAACCTGATAGTATTGTACATGGTGATCTGAAGCCTGAAAATATACTTCTTGATTCTGCACTTGGATGCAAGATATCTGAATTTGGGATTTGCAGGCTTGTGAGACAGGATTCACTCTATTGTCCTAGTTTTCGCTTGAGCACCGAGCCAAAGGGTTCTTTTACATATACAGATCCAGAGTTTCAGAGAAGTGGAATGCTGACACCCAAGTCTGACGTCTACTCCTTTGGGCTCATCATTTTGCAACTACTCACTGGTAGGACTCCAGCCGGATTGGCAATTGAAGTACGTAAAGCTGTTTCATGTGGAAAACTGACTTGGATTTTGGATTGTTCATCTGGAGAATGGCCTTCATCTGTGGCTACACGATTGGTTGAACTGGGACTGCAATGCTGTCAACAAAATTGTAGAGACAGACCAGAGCTAACGCCTAGTTTGGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGAGCGAGGTGTGCCCAATTTTTTCTTGTGCCCCATACTTCAGGAAATCATGCATCATCCTCAGGTTGCAGCTGATGGATTCACTTACGAAGGGGAAGCCATACGAGAATGGTTGGAAAGTGGGCATGAAACTTCTCCCAtgactaatttaaaattgagtcACCTTCATCTTACTCCAAATCATTCCCTACGACTCGCCATTCAAGACTGGCTCTGTAAATCCTA 2498 0.4363 MELLKPSHPSQHAATGDIFYGFSLPSSLPLGFNGLATSHRLEHTEECDEKVHVAVGKTVKKAVNLLQWAFTHFRNREIRILHVYQPSPVIPTLLGKLPATQANPEVVSAFRREERGQTMKLLEYYVSICLAAKVKASIMIADADQVHEGIVDLVIRHGIRKLVIGAAPENCMKVKGNSGKAKYTAKNAPPFCEIWFIYKGKHTWTREASEIPHSLPSCTQPVISAAGSMRSRSFQYARSELFNSERLQSNSARAEICNGIGSWVQGGKVETETAFSTSTSSRTSNSSPLISVGRDEYLVSPSQVEEERLNDQLIEAKTEVEAARDKAFAELLKCKRLESEAMEHIRRVNLFESAHGCELKLKKETEGALQDVIQEQEKLLVENEEVANELQRTMRNVALLDSRAQEANRRRDEAADELRLIQASISTLWHEKRQIRQQKMVALRWLEQWRSCGQLGAAHCNGVIGFAEGLPELAEFSLLDLQNATCNFSESFKIKQGGYGSIYKGEMSGKTVAIRKLHMHNMRGPAEFHQEVQILGSLRHPHLLTLLGVCPEAWSLVYEYLPNGSLQDYLFRKSNASPLTWNNRVRMIAEIASAICFLHSSKPDSIVHGDLKPENILLDSALGCKISEFGICRLVRQDSLYCPSFRLSTEPKGSFTYTDPEFQRSGMLTPKSDVYSFGLIILQLLTGRTPAGLAIEVRKAVSCGKLTWILDCSSGEWPSSVATRLVELGLQCCQQNCRDRPELTPSLVRELEQLHVSEERGVPNFFLCPILQEIMHHPQVAADGFTYEGEAIREWLESGHETSPMTNLKLSHLHLTPNHSLRLAIQDWLCKS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00136 832 ProSiteProfiles Protein kinase domain profile. 488 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00136 832 SUPERFAMILY Protein kinase-like (PK-like) 472 744 IPR011009 -
Bva09g00136 832 Gene3D Transferase(Phosphotransferase) domain 1 561 762 - -
Bva09g00136 832 PANTHER OS02G0152300 PROTEIN 37 831 - -
Bva09g00136 832 Coils Coil 306 326 - -
Bva09g00136 832 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 763 832 IPR013083 -
Bva09g00136 832 SMART serkin_6 488 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00136 832 PANTHER OS10G0100500 PROTEIN 37 831 - -
Bva09g00136 832 SMART Ubox_2 765 828 IPR003613 GO:0004842|GO:0016567
Bva09g00136 832 Pfam U-box domain 762 831 IPR003613 GO:0004842|GO:0016567
Bva09g00136 832 Gene3D HUPs 45 167 IPR014729 -
Bva09g00136 832 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 63 167 - -
Bva09g00136 832 CDD RING-Ubox_WDSUB1_like 766 807 - -
Bva09g00136 832 Coils Coil 369 424 - -
Bva09g00136 832 ProSiteProfiles U-box domain profile. 761 832 IPR003613 GO:0004842|GO:0016567
Bva09g00136 832 CDD STK_N 50 200 - -
Bva09g00136 832 SUPERFAMILY RING/U-box 759 831 - -
Bva09g00136 832 Pfam Protein tyrosine and serine/threonine kinase 493 744 IPR001245 GO:0004672|GO:0006468
Bva09g00136 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Bva09g00136 832 Gene3D Phosphorylase Kinase; domain 1 466 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00136 Bva-Chr9 632420 637317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00136 48 829 U-box Gene Family AT2G45910 39.281 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva09g00136 PK_Tyr_Ser-Thr 4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00136 - - gmx:100788846 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00136 09 632420 637317 Bva07g02507 07 20071612 20076813 BWGD
Bva09g00136 09 632420 637317 Bva09g00136 09 632420 637317 ECH