Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00132 ATGGGTGTTTGTTTGAGCATCCAAATTAAAGCTGAGAGCAGCCCATGTAACGCGGGGTTCAATTCAAATTACGTGAGCACAGATGGAAATGACCTTAGCACTACTAGTAGTAAGCCCTCGTCTGTCTCAGTGCCTCAGACTCCTCGGAGTGAGGGTGAGATCTTGGAGTCCTCCAATTTAAGAAGCTTTAGTATGGCGGAACTGAAGATGGCCACCAGAAATTTCCGTCCAGATAGCGTGTTAGGCGAAGGTGGTTTCGGATCAGTTTATAAGGGATGGATTGATGAACATTCATTGGCAGCTGCCAAACCTGGGACTGGCATTGTAGTTGCTGTAAAAAGACTTAATCAAGATGGTTTACAAGGTCACAAGGAGTGGTTGGCTGAAGTAAACTACCTTGGATTGCTTTCTCATCCTCATCTTGTGAAACTGATTGGGTACTGCTTTGAAGATGAACACCGCCTATTGGTCTATGAATTTATGCCTCGGGGAAGCTTGGAGAATCACTTGTTCAGGAGAGGCTCTTATTTCCAACCTCTTTCTTGGAGCCTCCGGATGAAGGTTGCCCTTGGTGCTGCAAAAGGACTCGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGTGATTTTAAGACTTCAAATATCTTGCTGGATTCAAATTATAATGCAAAACTTTCTGATTTTGGGCTGGCCAAGGATGGACCAACAGGTGACAAAAGTCATGTCTCTACCAGGGTAATGGGAACCTACGGATATGCAGCTCCTGAATATCTAGCGACTgGTCATCTAACTGCCAAGAGTGATGTGTATAGTTTTGGAGTTGTTATGCTTGAGATGTTATCGGGGCGGCGAGCAATTGACAAGAATCAACCGTCTGGGCAGCACAATTTGGTGGAATGGGCTAAACCATACCTGGCTAACAAGCGTAAGATTTTCCGCGTACTGGACAACCGTCTTGAAGGCCAGCGCTCAGTGGAGGATGCCTACAAAGTAGCTACTCTTGCTATGCGATGCCTGTCAACTGAATCCAAGTTCAGGCCAAACATGGATGAGGTTGTTACAGCTTTGGAGCGGCTGCAGATCCCCATTAATGTAAATGGTGGAGTCAATCAAAGCCCTTTTGATAATGTATCCCGAGCCCGTAGAAGAAGTGCTGATGATACTTGCAAGGGGAGAACTACTCCACCTTTTGCGCGCCCTTCTGCTTCCCCCCTCTGTGCTTG 1226 0.4608 MGVCLSIQIKAESSPCNAGFNSNYVSTDGNDLSTTSSKPSSVSVPQTPRSEGEILESSNLRSFSMAELKMATRNFRPDSVLGEGGFGSVYKGWIDEHSLAAAKPGTGIVVAVKRLNQDGLQGHKEWLAEVNYLGLLSHPHLVKLIGYCFEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVMLEMLSGRRAIDKNQPSGQHNLVEWAKPYLANKRKIFRVLDNRLEGQRSVEDAYKVATLAMRCLSTESKFRPNMDEVVTALERLQIPINVNGGVNQSPFDNVSRARRRSADDTCKGRTTPPFARPSASPLCA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00132 408 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Bva09g00132 408 MobiDBLite consensus disorder prediction 30 53 - -
Bva09g00132 408 MobiDBLite consensus disorder prediction 371 408 - -
Bva09g00132 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bva09g00132 408 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00132 408 Pfam Protein tyrosine and serine/threonine kinase 79 357 IPR001245 GO:0004672|GO:0006468
Bva09g00132 408 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Bva09g00132 408 Gene3D Transferase(Phosphotransferase) domain 1 161 369 - -
Bva09g00132 408 PANTHER KINASE 1B 24 365 - -
Bva09g00132 408 CDD STKc_IRAK 81 360 - -
Bva09g00132 408 PANTHER OS01G0588500 PROTEIN-RELATED 24 365 - -
Bva09g00132 408 SUPERFAMILY Protein kinase-like (PK-like) 42 357 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00132 Bva-Chr9 613112 615738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00132 53 357 Glycoside Hydrolase AT3G07070 52.614 3.39e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva09g00132 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00132 - - gmx:100798404 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00132 09 613112 615738 Bva07g02514 07 20102177 20105442 BWGD
Bva09g00132 09 613112 615738 Bva09g00132 09 613112 615738 ECH