Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00130 ATGGCTATGGCTATGACCGTGACCGCCGTGATCTGCATTGCCTCTCTCGTCTCGCTAATGTGCATGGTTGAAGCTAGAATTCCCGGGGTTTACACTGGGGATTCTTGGCAAAGTGCTCATGCCACCTTCTATGGAGGCTCTGATGCTTCTGGCACTATGGGTGGAGCTTGTGGGTATGGAAACCTGTACAGCCAAGGGTACGGCGTGAACACGGCGGCGTTGAGCACCGCACTTTTCAACAACGGACTGAGCTGCGGTGCCTGTTTTGAGATCAAGTGTGCAAATGAAAAACAATGGTGCCACTCGGGCAGTCCATCCATCTTTATTACGGCCACTAACTTCTGCCCACCCAATTATGCTCTTCCAAACGACAATGGCGGATGGTGCAACCCTCCTCGTCCACACTTTGACCTTGCCATGCCTATGTTCCTTAAGATTGCAGAGTATCGCGCCGGAATCGTCCCCGTTGCCTACCGCCGGGTGCCGTGCAGGAAGCAGGGAGGGATCAGGTTCACGATCAACGGCTTCCGTTACTTTAACCTGGTATTGATCAGCAACGCGGCGGGTGCAGGGGATATCGTGCGCGCTTATGTGAAGGGGTCGAGAACCGGTTGGATGCCCTTGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCGGTTCTGGTGGGCCAGTCATTATCGTTCAGGGTGACAGGCAGCGACAGGCGCACTTCTACCTCATGGAACATCGTCCCGGCCAATTGGCAATTCGGTCAAACTTTTACCGGAAAGAATTTTCGGGTCTG 788 0.5406 MAMAMTVTAVICIASLVSLMCMVEARIPGVYTGDSWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEKQWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNAAGAGDIVRAYVKGSRTGWMPLSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNIVPANWQFGQTFTGKNFRV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00130 262 Gene3D - 168 260 IPR036749 -
Bva09g00130 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 168 IPR007112 -
Bva09g00130 262 SUPERFAMILY Barwin-like endoglucanases 35 186 IPR036908 -
Bva09g00130 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 257 IPR007117 -
Bva09g00130 262 Pfam Lytic transglycolase 71 158 IPR009009 -
Bva09g00130 262 Gene3D - 23 164 IPR036908 -
Bva09g00130 262 PANTHER EXPANSIN 8 261 - -
Bva09g00130 262 SUPERFAMILY PHL pollen allergen 165 257 IPR036749 -
Bva09g00130 262 Pfam Expansin C-terminal domain 169 246 IPR007117 -
Bva09g00130 262 PANTHER EXPANSIN-A15 8 261 IPR002963 GO:0009664
Bva09g00130 262 SMART dpbb_1 71 158 IPR007112 -
Bva09g00130 262 PRINTS Expansin/Lol pI family signature 75 93 IPR007118 GO:0005576
Bva09g00130 262 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Bva09g00130 262 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Bva09g00130 262 PRINTS Expansin/Lol pI family signature 53 71 IPR007118 GO:0005576
Bva09g00130 262 PRINTS Expansin/Lol pI family signature 35 50 IPR007118 GO:0005576
Bva09g00130 262 PRINTS Expansin/Lol pI family signature 151 167 IPR007118 GO:0005576
Bva09g00130 262 PRINTS Expansin signature 66 80 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 93 104 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 143 156 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 167 179 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 179 200 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 243 259 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 126 143 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Bva09g00130 262 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00130 Bva-Chr9 603259 605684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00130 5 262 Expansin Gene Family AT2G39700 82.946 2.11e-164 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00130 - - gmx:100811296 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00130 09 603259 605684 Bva07g02516 07 20111578 20114156 BWGD
Bva09g00130 09 603259 605684 Bva09g00130 09 603259 605684 ECH
Bva09g00130 09 603259 605684 Bva12g02409 12 18230183 18232078 ECH
Bva09g00130 09 603259 605684 Bva07g02516 07 20111578 20114156 ECH
Bva02g01369 02 17363664 17365945 Bva09g00130 09 603259 605684 ECH
Bva01g00503 01 3933603 3936310 Bva09g00130 09 603259 605684 ECH