Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00114 ATGAATCCAGACGTGTCATCTACAACGCCATCGTATTGGTGTTATAGGTGTACTCGGTTTGTTCGGCTTTTTGGTCAGGAACTCATCGCTTGCCCGTACTGCGAAAGTGGGTTCGTCGAAGAGATCGAAAACAACCCTTCCTCTGACCATCATCTTAGTCCTTTTCCAGCTTCCGCGGTTTCCGTGTTCGGCGATAGCGCTCCAACTTCCTATAATTTAAGGAGACAAGGGTTCCGGCGAAGACGCCGCAACGCAGGTAGCCGATCTCCCTTTAATCCAGTAATCGTTCTTCGTGGACCCGCTGGAGAGGACGGTGCTGATCATGAAAGCAATAGCTTCGAATTATACTATGACGACGGAGATGGCTCCGGTCTCCGGCCATTACCATCGACCATGTCAGAGCTCTTGTTGGGATCGGGTTTCGATCGGTTGCTGGAACAGTTTTCCCAGATCGAAGTTAATGGGTTTGGGCGGCCGGAAAACCCGCCAGCGTCCAAAGCGGCCATAGAATCAATGCCGACGATTGAGATTATGGAGGAGCATGTGGGTACCGATGCACACTGTGCCGTATGCAAGGAAGCGTTTGAGCTGGGCTCGGAGGCTCGTGAAATGCCCTGGCCAATCGATGAAGAAACTGTGGGATTGACGATATGGAGGTTACCCGGTGGTGGATTTGCCGTCGGAAGGTTTTCTGGTGGTCGCATAGCTGGCGAAAGCCATTTACCAGTTGTATATACAGAAATGGATGGTGCGATTAATACAAATGGAGCGCCCAGAAGAATTTCCCGGGCAGTGAGTGGCAGCAGAGTAAGCGAAAGTCGTGGGCTAGGCAGAATTTTTCGCAATTTCTTCTCAATCTTTGGGAGGCGTCGGTCTAGGTCAATTTCTTCTTCGTCTTCAGTTTCCAGTTCTGAACATGGGTCCATGAGTAGAGGCCACGGCCAATCGAGTTTTGTGTTCAGCCGGAACTCGCGGAGGCGTAACAGAAGTTGGGTCTTGGGAAATTG 1007 0.5104 MNPDVSSTTPSYWCYRCTRFVRLFGQELIACPYCESGFVEEIENNPSSDHHLSPFPASAVSVFGDSAPTSYNLRRQGFRRRRRNAGSRSPFNPVIVLRGPAGEDGADHESNSFELYYDDGDGSGLRPLPSTMSELLLGSGFDRLLEQFSQIEVNGFGRPENPPASKAAIESMPTIEIMEEHVGTDAHCAVCKEAFELGSEAREMPWPIDEETVGLTIWRLPGGGFAVGRFSGGRIAGESHLPVVYTEMDGAINTNGAPRRISRAVSGSRVSESRGLGRIFRNFFSIFGRRRSRSISSSSSVSSSEHGSMSRGHGQSSFVFSRNSRRRNRSWVLGN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00114 335 Pfam zinc-ribbon 11 42 IPR039525 GO:0061630
Bva09g00114 335 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 7 205 - -
Bva09g00114 335 MobiDBLite consensus disorder prediction 296 320 - -
Bva09g00114 335 PANTHER OS05G0110000 PROTEIN 209 276 - -
Bva09g00114 335 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 209 276 - -
Bva09g00114 335 PANTHER OS05G0110000 PROTEIN 7 205 - -
Bva09g00114 335 Pfam Protein of unknown function (DUF1117) 213 325 IPR010543 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00114 Bva-Chr9 529398 531599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00114 127 205 C3H Transcription Factor Family AT5G01980 36.709 1.87e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00114 - - vvi:100265659 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00114 09 529398 531599 Bva07g02532 07 20196948 20198542 BWGD
Bva09g00114 09 529398 531599 Bva09g00114 09 529398 531599 ECH
Bva09g00114 09 529398 531599 Bva07g02532 07 20196948 20198542 ECH
Bva02g01393 02 17502227 17504026 Bva09g00114 09 529398 531599 ECH