Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00111 atgggGGAGGAGGTGAAGATGACCGAGTACGAAGCCGCTGCTGGTGTTGATGCTGACGATGACGATGAGCGTGTCTTGGGATGGGAGATGGGTCTTCCCACCGCCGATGATCTCACTCCTTTGTCTCAGCCGTTGATTCCGCCGGAGCTGGCCTCCGCCTTTAGCATCTCGCCGGTGCCGCATCGAACTGACCTCGATGTCAATCGTGCCTCGCAGACTACTCTATTGAGTCTTCGGGTAGGAACTCCTCAGGCCTTTTCCTCCAACAATTTCAAGTCCTTCAACCATGACCCGAGTCGAGACCCGATGGTGGTCGAGGGAGATGAAGAGACTGATCGAGACGGTTCGGGGCCTGATTCTAGGAAACTCAGGAAGAATGATTGTGCAGAAGAAGCTGATTCGGCTCTACGCACAGGCACTGACAATTCCATGGATGATCCATCTGCTCGCACCCTGAAGCGTCCTCGCCTTGTATGGACGCCACAGTTACACAAGCGCTTTGTTGATGTAGTCGCTCATCTGGGAATCAAGAACGCCGTCCCCAAAACAATTATGCAATTGATGAACGTTGAGGGATTGACTCGAGAAAACGTGGCCAGCCATCTGCAAAAGTACCGGCTTTACTTAAAAAGGATGCAGGGGCTCTCTAACGAGGGTCCATCATCGTCGGACCATCTCTTCGCATCTACCCCTGTGCCCCAGAGTTTGCACGAGTCTGGTGGAAGTGCTCATTCCCATGGAAATGGCCATCTCCCGGTTCACATTCCCATGCCGTATCCACCGCCTATGATGCCAATGCCCGTTCTTGGCATGCCACACGGTCATGGCCACATGGGCATGCCAGTGGCTAATCCAGGTCCCACTACAGCCTATCATGGCTTCGATTCTCATCCATATAACTTGTTGCAGCAAAGAGATTGGTCTGCCAATAAGTATGCTTCGGTTGTATCATACCCTCATGTTGCTCCTCACgataaatg 980 0.5214 MGEEVKMTEYEAAAGVDADDDDERVLGWEMGLPTADDLTPLSQPLIPPELASAFSISPVPHRTDLDVNRASQTTLLSLRVGTPQAFSSNNFKSFNHDPSRDPMVVEGDEETDRDGSGPDSRKLRKNDCAEEADSALRTGTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQSLHESGGSAHSHGNGHLPVHIPMPYPPPMMPMPVLGMPHGHGHMGMPVANPGPTTAYHGFDSHPYNLLQQRDWSANKYASVVSYPHVAPHDK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00111 326 MobiDBLite consensus disorder prediction 99 134 - -
Bva09g00111 326 Pfam Myb-like DNA-binding domain 158 206 IPR001005 -
Bva09g00111 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 155 207 IPR006447 GO:0003677
Bva09g00111 326 Gene3D - 151 213 - -
Bva09g00111 326 MobiDBLite consensus disorder prediction 215 242 - -
Bva09g00111 326 MobiDBLite consensus disorder prediction 87 149 - -
Bva09g00111 326 MobiDBLite consensus disorder prediction 215 249 - -
Bva09g00111 326 SUPERFAMILY Homeodomain-like 151 211 IPR009057 -
Bva09g00111 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 210 IPR017930 -
Bva09g00111 326 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 321 IPR044841 GO:0003700|GO:0006355
Bva09g00111 326 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00111 Bva-Chr9 515349 517938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00111 1 280 G2-like Transcription Factor Family AT3G46640 56.623 3.39e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva09g00111 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00111 - - zju:107411020 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00111 09 515349 517938 Bva09g00111 09 515349 517938 ECH