Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00110 ATGAAGGAACGAGCGTTGGGGGGTAATTTGATTAAGATGCATGGATTAACGTTGCCTCTAACTGCAAAcaagtttttctctttgagATCTCTTCAACCGTCCCTTATTTACCTAGCAAATCCTACCATACCCAGTTGTAAATTTAGCAATCAAGGTGACTTGAATAGCCTTCGATTCCATTCAGGATCCTATTGCCCCTGCTACTGgaataataagaagaaaagaagagtttGTATTACTCTTGTGAAAGCCAGCCGAGGGGAGTCTCCTTATCAAGTTTTGGGTGTTTCTCCTTCTGCAACTGTTGATGAAATCAAGAGGGCATATAGGAAACTTGCTCTAAAGTATCATCCCGATGTCAATAAAGAGGATAAGGCGCAGGAGAAGTTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCTAGTTCCCGTAGAAAATATGATTCTGGAAATGGTGGTTTTGATTTTTCGACATTCACCTCTCAAAGAAGGAGTTctcaagaggaagaagaattttatggATTAGAGGATTTCTTTAAAGATCTTCAAGAGGAATTCCGTAATTGGGAAGCAAGTGCTTCTTCACAAGGGAAGCCAAAGAGCCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTCGTGGAATTCCTTGAGAAAGAACTCAATGTAGCCGACCTAGAAGTCGAATCAAACAACAGCTTTAAGGATTCATCTCGCGTTTCCGGGAACGAGACCACTGGCAATGGTACTCAGGATGGGGCTGGCAAAGGAAACACCAGCAGTATTCAGGATAACCTTGATGATATAGAAGCCACGCTTGCTCAGTTGAAGAGAGAATTAGGTCTATA 854 0.3864 MKERALGGNLIKMHGLTLPLTANKFFSLRSLQPSLIYLANPTIPSCKFSNQGDLNSLRFHSGSYCPCYWNNKKKRRVCITLVKASRGESPYQVLGVSPSATVDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRRKYDSGNGGFDFSTFTSQRRSSQEEEEFYGLEDFFKDLQEEFRNWEASASSQGKPKSLWEELAEIGEEFVEFLEKELNVADLEVESNNSFKDSSRVSGNETTGNGTQDGAGKGNTSSIQDNLDDIEATLAQLKRELGL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00110 284 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Bva09g00110 284 SUPERFAMILY Chaperone J-domain 85 149 IPR036869 -
Bva09g00110 284 Gene3D DnaJ domain 87 197 IPR036869 -
Bva09g00110 284 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 73 282 - -
Bva09g00110 284 Coils Coil 261 281 - -
Bva09g00110 284 CDD DnaJ 90 142 IPR001623 -
Bva09g00110 284 MobiDBLite consensus disorder prediction 234 265 - -
Bva09g00110 284 Pfam DnaJ domain 90 150 IPR001623 -
Bva09g00110 284 PRINTS DnaJ domain signature 125 145 IPR001623 -
Bva09g00110 284 PRINTS DnaJ domain signature 109 124 IPR001623 -
Bva09g00110 284 PRINTS DnaJ domain signature 91 109 IPR001623 -
Bva09g00110 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 73 282 - -
Bva09g00110 284 SMART dnaj_3 88 145 IPR001623 -
Bva09g00110 284 ProSiteProfiles dnaJ domain profile. 89 153 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00110 Bva-Chr9 511538 513888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00110 81 151 C2H2 Transcription Factor Family AT1G74250 37.975 1.05e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00110 - - pavi:110757066 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00110 09 511538 513888 Bva09g00110 09 511538 513888 ECH