Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00103 ATGGAGGGTGATGATCAAGCAGCACCAGAAGCAGGCACAGATATTGAGCAAGGCGAAGGTGCAGCAATTAGTCAAGGCAGGTCCTATGAGTGTACCTTCTGCAAGAGGGGATTCTCTAATGCTCAAGCACTGGGTGGCCACATGAACATCCACAGGAAAGACAAAGCCAAGCTCAAGCAATCTCCAAACGAAGCCAAGCCTGCAGCTCCAGCACAAGACAGAAGCAACTTAAACTGGCCACGGAATGCTTCCTCCACCTCCGGGGATCGAACTAACCTTGTTGATATCAGACAACTTCCTCTTTTTGCTGAAACACCTTATAGCTGTGAACCTCAAAAGCCGAGTGATCATGATCAACTAATTCATGGGGAATCTACAGAAAAGGTTTCATCGTCTACCCATGATTCCTCAATGGATTTAGACCTTGAACTCAGACTTGGGCCTGAGCCACAAGACTCGCCACAGGCACCTTCTATGGGTACcagaaaattctttta 497 0.4688 MEGDDQAAPEAGTDIEQGEGAAISQGRSYECTFCKRGFSNAQALGGHMNIHRKDKAKLKQSPNEAKPAAPAQDRSNLNWPRNASSTSGDRTNLVDIRQLPLFAETPYSCEPQKPSDHDQLIHGESTEKVSSSTHDSSMDLDLELRLGPEPQDSPQAPSMGTRKFF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00103 165 PANTHER OS07G0101800 PROTEIN 85 156 - -
Bva09g00103 165 PANTHER OS07G0101800 PROTEIN 5 70 - -
Bva09g00103 165 MobiDBLite consensus disorder prediction 75 93 - -
Bva09g00103 165 Gene3D Classic Zinc Finger 15 87 - -
Bva09g00103 165 SUPERFAMILY beta-beta-alpha zinc fingers 26 56 IPR036236 -
Bva09g00103 165 MobiDBLite consensus disorder prediction 1 21 - -
Bva09g00103 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Bva09g00103 165 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 5 70 - -
Bva09g00103 165 MobiDBLite consensus disorder prediction 43 165 - -
Bva09g00103 165 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Bva09g00103 165 SMART c2h2final6 29 51 IPR013087 -
Bva09g00103 165 Pfam C2H2-type zinc finger 29 53 - -
Bva09g00103 165 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 85 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00103 Bva-Chr9 487366 487863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00103 17 147 C2H2 Transcription Factor Family AT3G09290 36.076 5.43e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva09g00103 zf-C2H2_6 9.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00103 - - gmx:100527724 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00103 09 487366 487863 Bva09g00103 09 487366 487863 ECH