Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00101 ATGGCAGAGATATGCTGTGGAGTTGTGAGTGAAAACGAGACGACATCGGGTGCGCGAGAAGCGAGGAGGAGGAGAATGGAGATTAGGCGGTTCAAGGTGGTTGAGGGAGTGGGTATGGATGTGGGTGTGGCCCAAAAGGAGTCGCACAGTGACGAGAAACGTCAGAAAGTGCAGCTTGGCTCACCGTCCTTGTCTCGAGTGTGTGAGAACGCCGTCGAGAATTGCGCCACCGACACAGAGAAAGGACTTGTAGTTGTAAGGCCAGAGACCCTTGAGAAACAGATTCCCGGTGTCGTTCCCTTCAACGTAACACTTCCTCTGCAAGTTTCCGTCCGGGACAACGGCGAGCATCCCAAGTTTGGCGTAGCATCCGTGTGTGGAAGGCGAAGAGATATGGAAGATGCAGTAGCCATCCACCCATGGTTTTGCCGTGATCACCAAACCATTGGTGAATTACACTACTTCGGAGTTTACGATGGCCACGGTTGCTCTCATGTGGCAGCCAAGTGTAGGGACAGACTACATGAGCTAGTCAAAGAAGAGCTGGAGAGGGACGATTGGTCTATGTCCTTCGGGTGGGAGGGTGCGATGGAGCGAAGCTTCTCGCAAATGGACAAGGAGGTGATTGCTTGGAACAATGCAAGTGTTTTGCAAGCAAATTGTCGGTGCGAGCTTCAATCGCCGGAATGCGATGCCGTTGGATCTACGGCAGTTGTTGCAATTTTGACACCCGAGAAGATAATCGTAGCTAACTGCGGCGATTCAAGGGCCGTTCTTTGCCGGGGCGGCAAGGCGATACCCCTCTCCTCCGATCACAAGCCGGATCGCCCAGATGAGCTGAACCGGATCCAGGAAGTGGGCGGGCGGGTAATCTACTGGGATGGAGCACGTGTTCTTGGAATGCTTGCCATGTCTAGAGCCATAGGGgataattatttgaagccGTACGTGATCTGCGAACCAGAGGTGACGATAACGGGTCGGACGGCGGAGGATGAGTGTTTGATACTAGCAAGTGACGGATTATGGGACGTGATAACGAATGAGACGGCATGTGGGGTGGCACGCATGTGTCTACGGGGAAGAAGTAACGCGGCGATGGGTGGCCCTGTCGAGTTGGAGAGGCAAGTGGAAGAAGAGGTGGCTGCTTCTGCCTCGGAGGTGTCCGACAAGGCATGCTCCGACGCTTCGACGTTGCTGACGAAGCTGGCTTTGGCCAGGCACTCCTCTGACAATGTCAGTGTCGTCGTGGTGAATCTCAGGAGAGACACGTA 1274 0.5377 MAEICCGVVSENETTSGAREARRRRMEIRRFKVVEGVGMDVGVAQKESHSDEKRQKVQLGSPSLSRVCENAVENCATDTEKGLVVVRPETLEKQIPGVVPFNVTLPLQVSVRDNGEHPKFGVASVCGRRRDMEDAVAIHPWFCRDHQTIGELHYFGVYDGHGCSHVAAKCRDRLHELVKEELERDDWSMSFGWEGAMERSFSQMDKEVIAWNNASVLQANCRCELQSPECDAVGSTAVVAILTPEKIIVANCGDSRAVLCRGGKAIPLSSDHKPDRPDELNRIQEVGGRVIYWDGARVLGMLAMSRAIGDNYLKPYVICEPEVTITGRTAEDECLILASDGLWDVITNETACGVARMCLRGRSNAAMGGPVELERQVEEEVAASASEVSDKACSDASTLLTKLALARHSSDNVSVVVVNLRRDT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00101 424 Gene3D - 115 424 IPR036457 -
Bva09g00101 424 ProSitePatterns PPM-type phosphatase domain signature. 154 162 IPR000222 GO:0043169
Bva09g00101 424 SUPERFAMILY PP2C-like 115 421 IPR036457 -
Bva09g00101 424 ProSiteProfiles PPM-type phosphatase domain profile. 119 420 IPR001932 -
Bva09g00101 424 PANTHER PROTEIN PHOSPHATASE 2C 37 108 423 - -
Bva09g00101 424 SMART PP2C_4 107 418 IPR001932 -
Bva09g00101 424 PANTHER ALPHABET, ISOFORM E-RELATED 108 423 - -
Bva09g00101 424 Pfam Protein phosphatase 2C 120 384 IPR001932 -
Bva09g00101 424 CDD PP2Cc 119 363 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00101 Bva-Chr9 477767 479755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00101 105 422 PP2C-type Phosphatase Gene Family AT1G07430 64.072 1.03e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00101 K14497 - zju:107410893 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00101 09 477767 479755 Bva09g00101 09 477767 479755 ECH