Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00093 ATGGGAGTTCGTTTCTCTAAATTCCCTTTATGCTGGTGGCCGTCtagcatcaaatcaaatcttcaCGATATGTCTGATATTGATGATGGAaacaagaatgagaaagaccaTTTACCTGGTTTCACTGAGTATAGCTTGGATCAACTAAGAAGTACCACTTCAGGATTTTCACCCGACAATATTGTCTCAGAGCACGGCGAGAAAGCTCCTAATGTTGTCTACAAAGGAGTTCTTGAAGATGACAGATGGATTGCTGTGAAGCGTTTTAACAAGTCGGCTTGGCCTGATTCTCGACAATTCCTAGAGGAAGCACGGGCAGTGGGCCAGCTTCGGAATGAGCGATTAGCTAACTTGATCGGGTGTTGCTGCGAGGGAGAAGAGAGATTGCTGGTTGCAGAGTTTATGCCCAATGAAACTCTATCCAAACATCTTTTTCATTGGGAGACGCAGCCCATGAAATGGGCAATGAGACTGAGAGTGGCCTTGTATTTGGCACAAGCATTGGATTTCTGCAGTAGTAAAGGAAGGGCATTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGATGGTAACCCCAGACTGTCTTGTTTTGGACTCATGAAGAACAGCAGAGATGGCGCAAGCTATAGTACTAATTTAGCCTTCACTCCTCCCGAGTACTTGAGGACAGGAAGAATCACCCCAGAAAGCGTGATTTACAGTTTTGGTACCCTTTTGCTTGATTTACTCAGCGGCAAGCATATTCCACCGAGTCATGCTCTTGACCTAATACGAAGCAAAAATTTTCTGCCGCTTATAGACTCATGTTTAGAGGGTCATTTTTCAAATGATGATGGAACCGAATTAGTGAGATTAGCGTCGCGTTGTTTACAATATGAACCACGTGAGAGGCCAAATGCCAAGTCACTTGTAACTGCTCTAACTCCTCTTCAGAAAGAAACTTGGGTTCCATCATATGTTTTGATGGGAATACCAGATGGAAGTGCATCTTCAAATCAATCCCTTTCATTAACACCTTTTGGTGAAGCTTGTTTTAGAAGAGACTTTACTGCAATACatgaaattttggaaaagTTGGGGTACAAGGATGACGAAGATGTTGCTAATGAGCTTTCCTTCCAAATGTGGACAAATCAGATACAAGAAACACTTACTTCCAAGAAGCACGGAGATTCTGCTTTTCGTGCTAAAGACTTCTCTACTGCCATTGATCGCTATACCCAATTCATCGATGCTGGGACGATGGTATCGCCAACTGTGTATGCCAGGCGCTGCTTCTGTTACTTAATGAATCAGATGCCACAAGAAGCTCTTGGAGATGCTATGCAAGCCCAATCAGTATCACCCACGTGGCCTACCGCATTCTATCTTCAAGCAGCTGCCCTTTTCAGCCTTGGAATGGACAATGATGCTCAGGAAAGTCTTAAAGACGGCACAACACTGGAAACCAGAGAGAATAGAAATTG 1475 0.421 MGVRFSKFPLCWWPSSIKSNLHDMSDIDDGNKNEKDHLPGFTEYSLDQLRSTTSGFSPDNIVSEHGEKAPNVVYKGVLEDDRWIAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALYLAQALDFCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGASYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRSKNFLPLIDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALTPLQKETWVPSYVLMGIPDGSASSNQSLSLTPFGEACFRRDFTAIHEILEKLGYKDDEDVANELSFQMWTNQIQETLTSKKHGDSAFRAKDFSTAIDRYTQFIDAGTMVSPTVYARRCFCYLMNQMPQEALGDAMQAQSVSPTWPTAFYLQAAALFSLGMDNDAQESLKDGTTLETRENRN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00093 491 Gene3D Tetratricopeptide repeat domain 384 491 IPR011990 GO:0005515
Bva09g00093 491 SUPERFAMILY Protein kinase-like (PK-like) 38 319 IPR011009 -
Bva09g00093 491 SUPERFAMILY TPR-like 388 488 IPR011990 GO:0005515
Bva09g00093 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Bva09g00093 491 ProSiteProfiles Protein kinase domain profile. 59 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00093 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Bva09g00093 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Bva09g00093 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 491 - -
Bva09g00093 491 Gene3D Transferase(Phosphotransferase) domain 1 136 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00093 Bva-Chr9 444441 448672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00093 40 315 Receptor kinase-like Gene Family AT3G58690 30.565 2.82e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva09g00093 PK_Tyr_Ser-Thr 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00093 - - gmx:732542 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00093 09 444441 448672 Bva09g00093 09 444441 448672 ECH