Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00083 ATGGCTGAAACACCTTTGAAGCTTCGTCGGTCTCCCAGAAAATCCAAACAAGAGTTGCAATTCAGTGCCAAATCCTCCCATCCTGTAACCCCAGTAACCCTACAAAGCCTAACTCCTCGCAGGTCCACGCGTTTGAAGTCTCTGCAGTTTGATTCAATCAATCTTCAGACATCTCTCAATCCTATTGATAAAGTTTGTGAAGATTCAGTGGGAACACCTGCTAATGTGAAGGAGTCTCGTCgatcaattaattttgctgAAAAACCTAATAAAGATAAAGTGATAACCCATAGAACTAGGGGGATTTCCAGAACCCCAAAGAAGGATGATAATAGTGTATCTGCGAAAACTCAAACTTCAGTCACAAAAAGTGAAAACTCAGAGTGGAAAGATTCAATCGTACATTCATTTGCACCAGCATCGCCTAATCAATTGGAAActaagaagaggaagaaagtagatgaaaaaagaattgttacTAGATCTATGGCTATAAATTATGGGAAATCTGCGAAAAGACAAAAGAGTGGCAGATTGCCTAAGAAACGAGTGTATTATAGGAAAGTGGTATATGATGGGGGCGAGTTTGAGGTGGGAGATGATGTTTATGTAAAGAGGAGAGAAGATGCGGCCTCAGATGATGAAGATCCAGAAGTGGAGGAATGTCGGTTGTGCTTTAACTCTGGGAATGATGTAATGATTGAGTGTGATGATTGTCTATGTGGATTTCATTTGAAATGTTTGACACCACCATTGAAGGAGGTTCCAGAAGGGGACTGGATATGCGAGTGCTGTGAGGCTCGTAAGGTGGGTAGAGATATTAAATTTCTAAGTCCTCCAGAGGGGAAAAGACTCGTTCGGACAATGAGGGAAAAACTTCTTTCAGGTGATTTATGGGCTGCCCACATTGAGAGCATATGGAAAGATGTAGATGGTACCTATTGGTGTCGTGCTCGATGGTATGTAATCCCAGAGGAGACTGCAGTTGGTAGACAACCACATAACCTGAGGAGAGAGCTTTACCGAACAAATGATTTTGCAGATATCGAGATGGAATCTGTCCTTAGACAATGCCAAATCAAGAGCCCCAAAGAATTTGCCACGGCAAATGATGAGGGAGATGATGTTTTCTTAtgtgaatatgaatatgacaTTCATTGGCACAGTTTCAAACGTCTTGCTGAGATAGACAATGACAATGAGGATGTTGAAGAGACTGGGAGTGATGATGATTGGAACCTTTGCAAGAAATTAGACTCTGATACAGATGAAGACGTTGAATatgaggaagaaaataaaagaagttcaCAATCCCGACCATCAACAACTCACGAGTTAGCTGCAAACCTACGGAAAGGGAAGTTCTTCGGACTTCAAAAGATAGGTACCAAAAATATTCCACAGCATGTGAGGTCCCACAAACAGAGTGAAATCGAGAGAGCAAAGGCTACACTGCTGTTGGCATCATTGCCCAAATCTTTGCCTTGTAGGAATAAAGAAATGGAGGAGATAACTTCATTCGTAAAAGATGCTATTTGTGATGATCAATGTTTGGGGCGTTGCCTCTACATACATGGTGTTCCTGGAACTGGAAAGACAATGAGTGTGCTATCAGTAATGAGGAATTTGAGGTCTGAAGTTGATGCAGGAAACCTAAGACCTTACTGTTTTGTGGAGATTAATGGTCTGAAATTGGCATCACCAGAGAATATATAcaggGTCATATATGAGGCGTTAAATGGGCACAGGGTCAGTTGGAAAAAGTCACTTCACTTGCTTAATGAGAGATTCGTAGAAGGGAAGAAAACTCAAGAAGAGGACCGGCCATGTATTCTGCTTATTGATGAACTTGACCTTCTTGTAACAAGAAACCAGTCGGTTCTTTACAACATTCTTGATTGGCCTACCAAGCCACATTCCAAATTGATTGTGATTGGAATAGCAAATACTATGGATCTTCCAGAGAAGTTACTTCCTCGGATATCAAGTCGAATGGGCATACATAGGCTTTGCTTTGGTCCATATAACTATCAGCAGCTTCAAGAAATCATTTCAAGCCGCCTCAGAGGAATAGATGTTTTCGAAAAACAAGCTGTCGAATTTGCTTCAAGAAAAGTTGCAGCAATTTCGGGAGATGCACGTCGTGCTTTGGAGATATGCAGACGTGCCGCAGAAATTGCAGGTTATCGGATCAAGAAGCAAATTTCAAGTCCTGATTCTGTTGCAGAAGTAAAGGGACTTGTTGGTATGTCAGACGTTGAAGCAGCCATCCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAGTTGTTCCAGATTTGGTAAAATATTCCTTACCGCTATGGTGCACGAACTTTATAAAACAGGAATGGGAGAAACCACTTTTGACAAGGTCGCAACGACCGTCTCCTGTCTCTGTACCAGCAATGGAGAATTGTTTCCTGGATATGATACACTTCTGCAAGTTGGATGTAAGCTTGGAGAATGCAGGATTATTTTATGCGAACCAGGTTTCAAGCACAAATTGCAAAAGTTGCAGCTTAATTTCCCCAGCGATGATGTAGCTTTTGCGCTGAGAGACTGCAAGGATTTATCTTGGTTGACCAAGTATCTAACTTA 2624 0.4017 MAETPLKLRRSPRKSKQELQFSAKSSHPVTPVTLQSLTPRRSTRLKSLQFDSINLQTSLNPIDKVCEDSVGTPANVKESRRSINFAEKPNKDKVITHRTRGISRTPKKDDNSVSAKTQTSVTKSENSEWKDSIVHSFAPASPNQLETKKRKKVDEKRIVTRSMAINYGKSAKRQKSGRLPKKRVYYRKVVYDGGEFEVGDDVYVKRREDAASDDEDPEVEECRLCFNSGNDVMIECDDCLCGFHLKCLTPPLKEVPEGDWICECCEARKVGRDIKFLSPPEGKRLVRTMREKLLSGDLWAAHIESIWKDVDGTYWCRARWYVIPEETAVGRQPHNLRRELYRTNDFADIEMESVLRQCQIKSPKEFATANDEGDDVFLCEYEYDIHWHSFKRLAEIDNDNEDVEETGSDDDWNLCKKLDSDTDEDVEYEEENKRSSQSRPSTTHELAANLRKGKFFGLQKIGTKNIPQHVRSHKQSEIERAKATLLLASLPKSLPCRNKEMEEITSFVKDAICDDQCLGRCLYIHGVPGTGKTMSVLSVMRNLRSEVDAGNLRPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKSLHLLNERFVEGKKTQEEDRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIHRLCFGPYNYQQLQEIISSRLRGIDVFEKQAVEFASRKVAAISGDARRALEICRRAAEIAGYRIKKQISSPDSVAEVKGLVGMSDVEAAIQEMFQAPHIQVMKSCSRFGKIFLTAMVHELYKTGMGETTFDKVATTVSCLCTSNGELFPGYDTLLQVGCKLGECRIILCEPGFKHKLQKLQLNFPSDDVAFALRDCKDLSWLTKYLT 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00083 874 ProSitePatterns Zinc finger PHD-type signature. 222 265 IPR019786 -
Bva09g00083 874 Gene3D - 164 420 IPR043151 -
Bva09g00083 874 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 152 869 - -
Bva09g00083 874 Pfam ATPase family associated with various cellular activities (AAA) 523 667 IPR003959 GO:0005524|GO:0016887
Bva09g00083 874 Gene3D - 474 669 IPR027417 -
Bva09g00083 874 SMART PHD_3 221 266 IPR001965 -
Bva09g00083 874 MobiDBLite consensus disorder prediction 95 111 - -
Bva09g00083 874 Gene3D - 670 761 - -
Bva09g00083 874 Pfam BAH domain 302 391 IPR001025 GO:0003682
Bva09g00083 874 MobiDBLite consensus disorder prediction 423 444 - -
Bva09g00083 874 Pfam AAA lid domain 695 728 IPR041083 -
Bva09g00083 874 MobiDBLite consensus disorder prediction 1 17 - -
Bva09g00083 874 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 152 869 IPR020793 -
Bva09g00083 874 SMART BAH_4 194 394 IPR001025 GO:0003682
Bva09g00083 874 MobiDBLite consensus disorder prediction 1 40 - -
Bva09g00083 874 CDD AAA 499 674 - -
Bva09g00083 874 MobiDBLite consensus disorder prediction 18 40 - -
Bva09g00083 874 SMART AAA_5 518 671 IPR003593 -
Bva09g00083 874 SUPERFAMILY FYVE/PHD zinc finger 209 271 IPR011011 -
Bva09g00083 874 MobiDBLite consensus disorder prediction 112 127 - -
Bva09g00083 874 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 279 IPR013083 -
Bva09g00083 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 736 IPR027417 -
Bva09g00083 874 ProSiteProfiles Zinc finger PHD-type profile. 219 268 IPR019787 -
Bva09g00083 874 ProSiteProfiles BAH domain profile. 277 394 IPR001025 GO:0003682
Bva09g00083 874 MobiDBLite consensus disorder prediction 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00083 Bva-Chr9 400879 409626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00083 10 873 Core DNA Replication Machinery Family AT4G14700 61.029 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00083 K02603 - gmx:100798547 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00083 09 400879 409626 Bva09g00083 09 400879 409626 ECH